RefGen (Project)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Description:As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from isolate strains collected from human body sites. The information gained from the reference genomes aided in taxonomic assignment and functional annotation of sequence generated from the HMP.

Abbreviation:RefGen

Results found

Linked to

	Label	Description
	RefGenAssemblies Collection (Entity type)	HMP Reference Genome sequence data (assemblies)
	2018RefGen Collection (Entity type)	Annotation files for HMP reference genomes released in 2018
	2013RefGen Collection (Entity type)	Annotation files for HMP reference genomes released in 2013
	2010RefGen Collection (Entity type)	Annotation files for HMP reference genomes released in 2010
	SAMN00000730 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	SAMN00000729 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	SAMN00627086 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	SAMN00001464 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	SAMN00627053 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	SAMN02463684 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project

RefGenAssemblies

Collection (Entity type)

HMP Reference Genome sequence data (assemblies)

2018RefGen

Collection (Entity type)

Annotation files for HMP reference genomes released in 2018

2013RefGen

Collection (Entity type)

Annotation files for HMP reference genomes released in 2013

2010RefGen

Collection (Entity type)

Annotation files for HMP reference genomes released in 2010

SAMN00000730

Biosample (Entity type)