2018RefGen (Collection)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:Annotation files for HMP reference genomes released in 2018

Abbreviation:2018RefGen

Results found

Linked to

	Label	Description
	RefGen Project (Entity type)	As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...
	2018RefGen SAMN02463816 Collection (Entity type)	2018 annotation of Fusobacterium nucleatum subsp. vincentii 3_1_27
	2018RefGen SAMN00001916 Collection (Entity type)	2018 annotation of Prevotella melaninogenica ATCC 25845
	2018RefGen SAMN02463807 Collection (Entity type)	2018 annotation of Prevotella sp. oral taxon 299 str. F0039
	2018RefGen SAMN00139181 Collection (Entity type)	2018 annotation of Brevibacterium mcbrellneri ATCC 49030
	2018RefGen SAMN02597449 Collection (Entity type)	2018 annotation of Providencia alcalifaciens F90-2004
	2018RefGen SAMN04477528 Collection (Entity type)	2018 annotation of Pseudomonas sp. HMSC072F09
	2018RefGen SAMN02463902 Collection (Entity type)	2018 annotation of Bergeyella zoohelcum ATCC 43767
	2018RefGen SAMN00253302 Collection (Entity type)	2018 annotation of Enterococcus casseliflavus ATCC 12755
	2018RefGen SAMN02596722 Collection (Entity type)	2018 annotation of Treponema denticola H1-T

RefGen

Project (Entity type)

As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...

2018RefGen SAMN02463816

Collection (Entity type)

2018 annotation of Fusobacterium nucleatum subsp. vincentii 3_1_27

2018RefGen SAMN00001916

Collection (Entity type)

2018 annotation of Prevotella melaninogenica ATCC 25845

2018RefGen SAMN02463807

Collection (Entity type)

2018 annotation of Prevotella sp. oral taxon 299 str. F0039

2018RefGen SAMN00139181

Collection (Entity type)

2018 annotation of Brevibacterium mcbrellneri ATCC 49030

2018RefGen SAMN02597449

Collection (Entity type)

2018 annotation of Providencia alcalifaciens F90-2004

2018RefGen SAMN04477528

Collection (Entity type)

2018 annotation of Pseudomonas sp. HMSC072F09

2018RefGen SAMN02463902

Collection (Entity type)

2018 annotation of Bergeyella zoohelcum ATCC 43767

2018RefGen SAMN00253302

Collection (Entity type)

2018 annotation of Enterococcus casseliflavus ATCC 12755

2018RefGen SAMN02596722

Collection (Entity type)

2018 annotation of Treponema denticola H1-T

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.