RefGenAssemblies (Collection)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:HMP Reference Genome sequence data (assemblies)

Abbreviation:RefGenAssemblies

Results found

Linked to

	Label	Description
	RefGen Project (Entity type)	As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...
	RefGenAssemblies SAMN02732485 Collection (Entity type)	Assembly sequence for Staphylococcus aureus 880
	RefGenAssemblies SAMN00001491 Collection (Entity type)	Assembly sequence for Staphylococcus aureus subsp. aureus USA300_TCH959
	RefGenAssemblies SAMN04498854 Collection (Entity type)	Assembly sequence for Corynebacterium sp. HMSC061H03
	RefGenAssemblies SAMN02299527 Collection (Entity type)	Assembly sequence for Streptococcus pneumoniae PNI0009
	RefGenAssemblies SAMN04477660 Collection (Entity type)	Assembly sequence for Actinomyces sp. HMSC064C12
	RefGenAssemblies SAMN04495804 Collection (Entity type)	Assembly sequence for Corynebacterium sp. HMSC074A01
	RefGenAssemblies SAMN01162070 Collection (Entity type)	Assembly sequence for Streptococcus parasanguinis CC87K
	RefGenAssemblies SAMN04498583 Collection (Entity type)	Assembly sequence for Staphylococcus sp. HMSC058E03
	RefGenAssemblies SAMN02463863 Collection (Entity type)	Assembly sequence for Dysgonomonas mossii DSM 22836

RefGen

Project (Entity type)

As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...

RefGenAssemblies SAMN02732485

Collection (Entity type)

Assembly sequence for Staphylococcus aureus 880

RefGenAssemblies SAMN00001491

Collection (Entity type)

Assembly sequence for Staphylococcus aureus subsp. aureus USA300_TCH959

RefGenAssemblies SAMN04498854

Collection (Entity type)

Assembly sequence for Corynebacterium sp. HMSC061H03

RefGenAssemblies SAMN02299527

Collection (Entity type)

Assembly sequence for Streptococcus pneumoniae PNI0009

RefGenAssemblies SAMN04477660

Collection (Entity type)

Assembly sequence for Actinomyces sp. HMSC064C12

RefGenAssemblies SAMN04495804

Collection (Entity type)

Assembly sequence for Corynebacterium sp. HMSC074A01

RefGenAssemblies SAMN01162070

Collection (Entity type)

Assembly sequence for Streptococcus parasanguinis CC87K

RefGenAssemblies SAMN04498583

Collection (Entity type)

Assembly sequence for Staphylococcus sp. HMSC058E03

RefGenAssemblies SAMN02463863

Collection (Entity type)

Assembly sequence for Dysgonomonas mossii DSM 22836

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.