2013RefGen (Collection)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:Annotation files for HMP reference genomes released in 2013

Abbreviation:2013RefGen

Results found

Linked to

	Label	Description
	RefGen Project (Entity type)	As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...
	2013RefGen SAMN00792225 Collection (Entity type)	2013 annotation of Capnocytophaga sp. oral taxon 412 str. F0487
	2013RefGen SAMN00000729 Collection (Entity type)	2013 annotation of [Clostridium] hiranonis DSM 13275
	2013RefGen SAMN00000730 Collection (Entity type)	2013 annotation of Tyzzerella nexilis DSM 1787
	2013RefGen SAMN00627054 Collection (Entity type)	2013 annotation of Schaalia odontolytica ATCC 17982
	2013RefGen SAMN02463890 Collection (Entity type)	2013 annotation of Staphylococcus lugdunensis ACS-027-V-Sch2
	2013RefGen SAMN00001471 Collection (Entity type)	2013 annotation of Lactobacillus acidophilus ATCC 4796
	2013RefGen SAMN02463761 Collection (Entity type)	2013 annotation of Bacteroides sp. 3_1_23
	2013RefGen SAMN00189109 Collection (Entity type)	2013 annotation of Enterococcus faecalis TX0109
	2013RefGen SAMN00189192 Collection (Entity type)	2013 annotation of Cutibacterium acnes HL002PA2

RefGen

Project (Entity type)

As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...

2013RefGen SAMN00792225

Collection (Entity type)

2013 annotation of Capnocytophaga sp. oral taxon 412 str. F0487

2013RefGen SAMN00000729

Collection (Entity type)

2013 annotation of [Clostridium] hiranonis DSM 13275

2013RefGen SAMN00000730

Collection (Entity type)

2013 annotation of Tyzzerella nexilis DSM 1787

2013RefGen SAMN00627054

Collection (Entity type)

2013 annotation of Schaalia odontolytica ATCC 17982

2013RefGen SAMN02463890

Collection (Entity type)

2013 annotation of Staphylococcus lugdunensis ACS-027-V-Sch2

2013RefGen SAMN00001471

Collection (Entity type)

2013 annotation of Lactobacillus acidophilus ATCC 4796

2013RefGen SAMN02463761

Collection (Entity type)

2013 annotation of Bacteroides sp. 3_1_23

2013RefGen SAMN00189109

Collection (Entity type)

2013 annotation of Enterococcus faecalis TX0109

2013RefGen SAMN00189192

Collection (Entity type)

2013 annotation of Cutibacterium acnes HL002PA2

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.