2018RefGen SAMN02597449 (Collection)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:2018 annotation of Providencia alcalifaciens F90-2004

Abbreviation:2018RefGen_SAMN02597449

Results found

Linked to

	Label	Description
	RefGen Project (Entity type)	As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...
	2018RefGen Collection (Entity type)	Annotation files for HMP reference genomes released in 2018
	SAMN02597449 Biosample (Entity type)	A biosample from HMP produced as part of the RefGen project
	JACS00000000.cds.bz2 File (Entity type)	A 1.12 MB file from HMP produced from OBI:0002117 as part of the RefGen project
	Providencia alcalifaciens F90-2004 Taxonomy (Entity type)	A Taxonomy
	JACS00000000.pep.bz2 File (Entity type)	A 730 KB file from HMP produced from OBI:0002117 as part of the RefGen project
	JACS00000000 attributor.annotation.gff3.bz2 File (Entity type)	A 1.48 MB file from HMP produced from OBI:0002117 as part of the RefGen project

RefGen

Project (Entity type)

As part of the Human Microbiome Project Phase 1 (HMP1), ~3000 reference genomes were sequenced from ...

2018RefGen

Collection (Entity type)

Annotation files for HMP reference genomes released in 2018

SAMN02597449

Biosample (Entity type)

A biosample from HMP produced as part of the RefGen project

JACS00000000.cds.bz2

File (Entity type)

A 1.12 MB file from HMP produced from OBI:0002117 as part of the RefGen project

Providencia alcalifaciens F90-2004

Taxonomy (Entity type)

A Taxonomy

JACS00000000.pep.bz2

File (Entity type)

A 730 KB file from HMP produced from OBI:0002117 as part of the RefGen project

JACS00000000 attributor.annotation.gff3.bz2

File (Entity type)

A 1.48 MB file from HMP produced from OBI:0002117 as part of the RefGen project

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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