PLOD3 (Gene)

Entrez Gene ID: 8985

Description: procollagen-lysine,2-oxoglutarate 5-dioxygenase 3

Analyze

CFDE DD-Knowledge Graph

The CFDE Data Distillery Knowledge Graph contains entities and relationships across the CFDE. View PLOD3's neighborhood in the knowledge graph.

Submit

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PLOD3.

CFDE Gene-Centric Appyter

The CFDE Gene Centric Appyter Resolves and Displays Gene-Centric information from CFDE APIs. Execute the Appyter using PLOD3.

Submit

GDLPA Landing Pages Links

The Gene and Drug Landing Page Aggregator (GDLPA) finds links to primary and secondary source information from CFDE and other resources. Discover landing pages for PLOD3.

Submit

Gene Sets (660)

LINCS L1000 Chem Pert Consensus Sigs (45)

A gene set library provided by LINCS

ARCHS4 IDG Coexp (2)

A gene set library provided by IDG

GlyGen Glycosylated Proteins 2022 (12)

A gene set library provided by GlyGen

KOMP2 Mouse Phenotypes 2022 (7)

A gene set library provided by KOMP2

LINCS L1000 CRISPR KO Consensus Sigs (119)

A gene set library provided by LINCS

rummageo gene perturbations (170)

A gene set library provided by LINCS

LINCS L1000 Consensus Median Signatures (35)

A gene set library provided by LINCS

rummageo chemical perturbations (267)

A gene set library provided by LINCS

Molecular Transducers of Physical Activity Consortium

MoTrPAC Endurance Trained Rats 2023 (1)

A gene set library provided by MoTrPAC

GTEx Tissues V8 2023 (2)

A gene set library provided by GTEx

Knowledge Graph Assertions

Source	Relation	Target
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	UDP-galactose Metabolite (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	uridine diphosphate Metabolite (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	UDP-glucose Metabolite (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	Uridine Diphosphate Metabolite (Entity type)
KFGENEBIN:PLOD3-variant-count CUI KFGENEBIN (Entity type)	Gene has variants Knowledge Graph Relation (Entity type)	PLOD3 Gene (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	Succinic Acid Metabolite (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	succinic acid Metabolite (Entity type)
PLOD3 Gene (Entity type)	Causally influences Knowledge Graph Relation (Entity type)	2-oxopentanedioic acid Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
UDP-galactose
Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
uridine diphosphate
Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
UDP-glucose
Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
Uridine Diphosphate
Metabolite (Entity type)

KFGENEBIN:PLOD3-variant-count CUI
KFGENEBIN (Entity type)
Gene has variants
Knowledge Graph Relation (Entity type)
PLOD3
Gene (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
Succinic Acid
Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
succinic acid
Metabolite (Entity type)

PLOD3
Gene (Entity type)
Causally influences
Knowledge Graph Relation (Entity type)
2-oxopentanedioic acid
Metabolite (Entity type)

DISPLAY PER PAGE

Knowledge Graph Assertions

	Source	Relation	Target	Evidence
Loading results...

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.