GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 11 v 12 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with .

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with .

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with .

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with .

Results found

Linked to

	Label	Description
	PROM1 Gene (Entity type)	prominin 1
	EIF5A Gene (Entity type)	eukaryotic translation initiation factor 5A
	PTPN12 Gene (Entity type)	protein tyrosine phosphatase non-receptor type 12
	SRC Gene (Entity type)	SRC proto-oncogene, non-receptor tyrosine kinase
	PVT1 Gene (Entity type)	Pvt1 oncogene
	MRPS18B Gene (Entity type)	mitochondrial ribosomal protein S18B
	IFRD2 Gene (Entity type)	interferon related developmental regulator 2
	TGFBR2 Gene (Entity type)	transforming growth factor beta receptor 2
	S100A2 Gene (Entity type)	S100 calcium binding protein A2
	DANCR Gene (Entity type)	differentiation antagonizing non-protein coding RNA

PROM1

Gene (Entity type)

prominin 1

EIF5A

Gene (Entity type)

eukaryotic translation initiation factor 5A

PTPN12

Gene (Entity type)

protein tyrosine phosphatase non-receptor type 12

SRC

Gene (Entity type)

SRC proto-oncogene, non-receptor tyrosine kinase

PVT1

Gene (Entity type)

Pvt1 oncogene

MRPS18B

Gene (Entity type)

mitochondrial ribosomal protein S18B

IFRD2

Gene (Entity type)

interferon related developmental regulator 2

TGFBR2

Gene (Entity type)

transforming growth factor beta receptor 2

S100A2

Gene (Entity type)

S100 calcium binding protein A2

DANCR

Gene (Entity type)

differentiation antagonizing non-protein coding RNA

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.