The CFDE Workbench Processed Data Search allows searching across participating Common Fund programs' contributed processed data which includes Knowledge Graph Assertions, the Crosscut Metadata Model (C2M2) metadata about raw files, Attribute Tables and Sparse Matrices (XMTs). The files themselves and the contents of these processed data files can be located and related content navigated to.
Search works like many other search engines.
| Syntax | Explanation |
|---|---|
unquoted text | text not inside quote marks will be converted to boolean AND |
"quoted text" | text inside quote marks will be converted to bigrams (ordering preserved) |
or | the word "or" will be converted to boolean OR |
-text | a dash will apply an exclusion to the following text |
Here are some representative queries:
| Search text | Explanation |
|---|---|
| nephropathy diabetic | Finds records that contain both the term 'diabetic' and the term 'nephropathy', not necessarily in that order |
| gtex or sparc | Matches any document from GTEx or sparc |
| "knowledge graph" -eqtl | Matches knowledge graph (but not graph knowledge) but not records containing "eqtl" |