GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 1 v 12 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_12_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_12_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_12_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_12_human_dn.

Results found

Linked to

	Label	Description
	MT1E Gene (Entity type)	metallothionein 1E
	SLC38A1 Gene (Entity type)	solute carrier family 38 member 1
	TFPI Gene (Entity type)	tissue factor pathway inhibitor
	ANXA3 Gene (Entity type)	annexin A3
	NEBL Gene (Entity type)	nebulette
	GLUL Gene (Entity type)	glutamate-ammonia ligase
	ALDH1A3 Gene (Entity type)	aldehyde dehydrogenase 1 family member A3
	MARCKS Gene (Entity type)	myristoylated alanine rich protein kinase C substrate
	SRC Gene (Entity type)	SRC proto-oncogene, non-receptor tyrosine kinase
	TGFBR2 Gene (Entity type)	transforming growth factor beta receptor 2

MT1E

Gene (Entity type)

metallothionein 1E

SLC38A1

Gene (Entity type)

solute carrier family 38 member 1

TFPI

Gene (Entity type)

tissue factor pathway inhibitor

ANXA3

Gene (Entity type)

annexin A3

NEBL

Gene (Entity type)

nebulette

GLUL

Gene (Entity type)

glutamate-ammonia ligase

ALDH1A3

Gene (Entity type)

aldehyde dehydrogenase 1 family member A3

MARCKS

Gene (Entity type)

myristoylated alanine rich protein kinase C substrate

SRC

Gene (Entity type)

SRC proto-oncogene, non-receptor tyrosine kinase

TGFBR2

Gene (Entity type)

transforming growth factor beta receptor 2

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.