hmgc2 stool (Collection)

Id Namespace:

HMP default ID namespace

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

HMP

DCC (Entity type)

Has Time Series Data:false

Description:This collection contains clusters of individual assembly annotations (refer "hmgi2" collection) from stool samples, which were generated using usearch v8.1.1861. Proteins were compared at a 90% identity cut-off and those overlapping were considered redundant and removed, resulting in a non-redundant catalog of bacterial proteins. Output is provided as an amino acid multifasta file.

Abbreviation:hmgc2_stool

Results found

Linked to

	Label	Description
	HHS Project (Entity type)	The Healthy Human Subjects project is part of phase 1 of the Human Micrbiome Project and involved ch...
	HHS 159753524 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 763577454 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 763901136 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	hmgc-stool-0.90-centroids.fa.bz2 File (Entity type)	A 957 MB file from HMP produced from OBI:0002623 as part of the HHS project
	HHS 765337473 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 160502038 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 160319967 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 765094712 Subject (Entity type)	A subject from HMP produced as part of the HHS project
	HHS 763961826 Subject (Entity type)	A subject from HMP produced as part of the HHS project

HHS

Project (Entity type)

The Healthy Human Subjects project is part of phase 1 of the Human Micrbiome Project and involved ch...

HHS 159753524

Subject (Entity type)