PR000733 (Project)

Id Namespace:

UCSD Metabolomics Workbench

Identifier Namespace (Entity type)

Dcc Asset:

MW submission packet 20251214.zip

Processed File (Entity type)

Dcc:

Metabolomics

DCC (Entity type)

Persistent Id:http://dx.doi.org/10.21228/M8XM40

Description:We developed a computational metabolomics workflow to characterize metabolite structures by using the set of fully 13C-labelled and non-labelled LC-MS/MS data. The platform was applied to structure elucidations for 31 tissues of 12 plant species, resulting in the assignments of 1,092 structures and 344 formulas to 3,604 carbon-determined metabolite ions. We also applied the methodology to find the trait-metabolite associations in natural accessions of Arabidopsis thaliana.

Results found

Linked to

	Label	Description
	PPR00001 Project (Entity type)	Metabolomics
	SU001140 Subject (Entity type)	A subject from Metabolomics produced as part of the PR000733 project
	SU001139 Subject (Entity type)	A subject from Metabolomics produced as part of the PR000733 project
	ST001096.zip File (Entity type)	A 12.7 GB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	ST001095.zip File (Entity type)	A 5.00 GB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	ST001095 AN001782 Results.txt File (Entity type)	A 714 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	ST001096 AN001784 Results.txt File (Entity type)	A 311 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	ST001095 AN001781 Results.txt File (Entity type)	A 859 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	ST001096 AN001783 Results.txt File (Entity type)	A 253 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project
	SA074753 Biosample (Entity type)	A biosample from Metabolomics produced as part of the PR000733 project

PPR00001

Project (Entity type)

Metabolomics

SU001140

Subject (Entity type)

A subject from Metabolomics produced as part of the PR000733 project

SU001139

Subject (Entity type)

A subject from Metabolomics produced as part of the PR000733 project

ST001096.zip

File (Entity type)

A 12.7 GB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

ST001095.zip

File (Entity type)

A 5.00 GB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

ST001095 AN001782 Results.txt

File (Entity type)

A 714 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

ST001096 AN001784 Results.txt

File (Entity type)

A 311 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

ST001095 AN001781 Results.txt

File (Entity type)

A 859 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

ST001096 AN001783 Results.txt

File (Entity type)

A 253 KB file from Metabolomics produced from OBI:0003097 as part of the PR000733 project

SA074753

Biosample (Entity type)

A biosample from Metabolomics produced as part of the PR000733 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

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