GSE159678 hydroxychloroquine 4 v 3 human dn (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE159678_hydroxychloroquine_4_v_3_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE159678_hydroxychloroquine_4_v_3_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE159678_hydroxychloroquine_4_v_3_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE159678_hydroxychloroquine_4_v_3_human_dn.

Results found

Linked to

	Label	Description
	CXCL8 Gene (Entity type)	C-X-C motif chemokine ligand 8
	ATF3 Gene (Entity type)	activating transcription factor 3
	CHI3L1 Gene (Entity type)	chitinase 3 like 1
	FABP4 Gene (Entity type)	fatty acid binding protein 4
	TFPI2 Gene (Entity type)	tissue factor pathway inhibitor 2
	TM4SF1 Gene (Entity type)	transmembrane 4 L six family member 1
	CA12 Gene (Entity type)	carbonic anhydrase 12
	HMGCS1 Gene (Entity type)	3-hydroxy-3-methylglutaryl-CoA synthase 1
	ALCAM Gene (Entity type)	activated leukocyte cell adhesion molecule
	CD9 Gene (Entity type)	CD9 molecule

CXCL8

Gene (Entity type)

C-X-C motif chemokine ligand 8

ATF3

Gene (Entity type)

activating transcription factor 3

CHI3L1

Gene (Entity type)

chitinase 3 like 1

FABP4

Gene (Entity type)

fatty acid binding protein 4

TFPI2

Gene (Entity type)

tissue factor pathway inhibitor 2

TM4SF1

Gene (Entity type)

transmembrane 4 L six family member 1

CA12

Gene (Entity type)

carbonic anhydrase 12

HMGCS1

Gene (Entity type)

3-hydroxy-3-methylglutaryl-CoA synthase 1

ALCAM

Gene (Entity type)

activated leukocyte cell adhesion molecule

CD9

Gene (Entity type)

CD9 molecule

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.