GSE224004 GSE224005 CHD4 EWS-FLI1 knockdown 0 v 5 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE224004_GSE224005_CHD4_EWS-FLI1 knockdown_0_v_5_human_up.

Results found

Linked to

	Label	Description
	GNAS Gene (Entity type)	GNAS complex locus
	ATF3 Gene (Entity type)	activating transcription factor 3
	SELENOP Gene (Entity type)	selenoprotein P
	DKK1 Gene (Entity type)	dickkopf Wnt signaling pathway inhibitor 1
	PEG10 Gene (Entity type)	paternally expressed 10
	IFIT1 Gene (Entity type)	interferon induced protein with tetratricopeptide repeats 1
	ALDH1A1 Gene (Entity type)	aldehyde dehydrogenase 1 family member A1
	IFI6 Gene (Entity type)	interferon alpha inducible protein 6
	APOD Gene (Entity type)	apolipoprotein D
	IGFBP5 Gene (Entity type)	insulin like growth factor binding protein 5

GNAS

Gene (Entity type)

GNAS complex locus

ATF3

Gene (Entity type)

activating transcription factor 3

SELENOP

Gene (Entity type)

selenoprotein P

DKK1

Gene (Entity type)

dickkopf Wnt signaling pathway inhibitor 1

PEG10

Gene (Entity type)

paternally expressed 10

IFIT1

Gene (Entity type)

interferon induced protein with tetratricopeptide repeats 1

ALDH1A1

Gene (Entity type)

aldehyde dehydrogenase 1 family member A1

IFI6

Gene (Entity type)

interferon alpha inducible protein 6

APOD

Gene (Entity type)

apolipoprotein D

IGFBP5

Gene (Entity type)

insulin like growth factor binding protein 5

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.