GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 1 v 10 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_10_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_10_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_10_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_1_v_10_human_dn.

Results found

Linked to

	Label	Description
	PHLDA1 Gene (Entity type)	pleckstrin homology like domain family A member 1
	GLUL Gene (Entity type)	glutamate-ammonia ligase
	KRT23 Gene (Entity type)	keratin 23
	TGFBR2 Gene (Entity type)	transforming growth factor beta receptor 2
	CAV1 Gene (Entity type)	caveolin 1
	MET Gene (Entity type)	MET proto-oncogene, receptor tyrosine kinase
	PLK1 Gene (Entity type)	polo like kinase 1
	RAD23B Gene (Entity type)	RAD23 nucleotide excision repair protein B
	KIF20A Gene (Entity type)	kinesin family member 20A
	SMC1A Gene (Entity type)	structural maintenance of chromosomes 1A

PHLDA1

Gene (Entity type)

pleckstrin homology like domain family A member 1

GLUL

Gene (Entity type)

glutamate-ammonia ligase

KRT23

Gene (Entity type)

keratin 23

TGFBR2

Gene (Entity type)

transforming growth factor beta receptor 2

CAV1

Gene (Entity type)

caveolin 1

MET

Gene (Entity type)

MET proto-oncogene, receptor tyrosine kinase

PLK1

Gene (Entity type)

polo like kinase 1

RAD23B

Gene (Entity type)

RAD23 nucleotide excision repair protein B

KIF20A

Gene (Entity type)

kinesin family member 20A

SMC1A

Gene (Entity type)

structural maintenance of chromosomes 1A

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.