GSE176008 pyridoxine 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE176008_pyridoxine_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE176008_pyridoxine_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE176008_pyridoxine_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE176008_pyridoxine_0_v_1_human_up.

Results found

Linked to

	Label	Description
	TM4SF1 Gene (Entity type)	transmembrane 4 L six family member 1
	IGFBP2 Gene (Entity type)	insulin like growth factor binding protein 2
	SLC38A1 Gene (Entity type)	solute carrier family 38 member 1
	TLR4 Gene (Entity type)	toll like receptor 4
	BASP1 Gene (Entity type)	brain abundant membrane attached signal protein 1
	MX1 Gene (Entity type)	MX dynamin like GTPase 1
	SRGN Gene (Entity type)	serglycin
	ANXA3 Gene (Entity type)	annexin A3
	LEF1 Gene (Entity type)	lymphoid enhancer binding factor 1
	THBS1 Gene (Entity type)	thrombospondin 1

TM4SF1

Gene (Entity type)

transmembrane 4 L six family member 1

IGFBP2

Gene (Entity type)

insulin like growth factor binding protein 2

SLC38A1

Gene (Entity type)

solute carrier family 38 member 1

TLR4

Gene (Entity type)

toll like receptor 4

BASP1

Gene (Entity type)

brain abundant membrane attached signal protein 1

MX1

Gene (Entity type)

MX dynamin like GTPase 1

SRGN

Gene (Entity type)

serglycin

ANXA3

Gene (Entity type)

annexin A3

LEF1

Gene (Entity type)

lymphoid enhancer binding factor 1

THBS1

Gene (Entity type)

thrombospondin 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.