GSE85880 GSE85881 tretinoin cardiac muscle cell 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with .

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with .

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with .

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with .

Results found

Linked to

	Label	Description
	AQP3 Gene (Entity type)	aquaporin 3 (Gill blood group)
	CLU Gene (Entity type)	clusterin
	ATF3 Gene (Entity type)	activating transcription factor 3
	IRS2 Gene (Entity type)	insulin receptor substrate 2
	MMP12 Gene (Entity type)	matrix metallopeptidase 12
	NBPF8 Gene (Entity type)	NBPF member 8
	LINC00839 Gene (Entity type)	long intergenic non-protein coding RNA 839
	SPON1 Gene (Entity type)	spondin 1
	HAGLR Gene (Entity type)	HOXD antisense growth-associated long non-coding RNA
	HMGB1P5 Gene (Entity type)	high mobility group box 1 pseudogene 5

AQP3

Gene (Entity type)

aquaporin 3 (Gill blood group)

CLU

Gene (Entity type)

clusterin

ATF3

Gene (Entity type)

activating transcription factor 3

IRS2

Gene (Entity type)

insulin receptor substrate 2

MMP12

Gene (Entity type)

matrix metallopeptidase 12

NBPF8

Gene (Entity type)

NBPF member 8

LINC00839

Gene (Entity type)

long intergenic non-protein coding RNA 839

SPON1

Gene (Entity type)

spondin 1

HAGLR

Gene (Entity type)

HOXD antisense growth-associated long non-coding RNA

HMGB1P5

Gene (Entity type)

high mobility group box 1 pseudogene 5

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.