MSX1 (Gene)

Entrez Gene ID: 4487

Description: msh homeobox 1

Analyze

CFDE DD-Knowledge Graph

The CFDE Data Distillery Knowledge Graph contains entities and relationships across the CFDE. View MSX1's neighborhood in the knowledge graph.

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Playbook Workflow Builder: Gene-Centric Workflow

View Gene-Centric information about the gene from a pre-built PWB workflow. View the workflow with MSX1.

CFDE Gene-Centric Appyter

The CFDE Gene Centric Appyter Resolves and Displays Gene-Centric information from CFDE APIs. Execute the Appyter using MSX1.

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GDLPA Landing Pages Links

The Gene and Drug Landing Page Aggregator (GDLPA) finds links to primary and secondary source information from CFDE and other resources. Discover landing pages for MSX1.

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Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with MSX1.

Gene Sets (4329)

LINCS L1000 Chem Pert Consensus Sigs (1129)

A gene set library provided by LINCS

ARCHS4 IDG Coexp (3)

A gene set library provided by IDG

KOMP2 Mouse Phenotypes 2022 (7)

A gene set library provided by KOMP2

LINCS L1000 CRISPR KO Consensus Sigs (1083)

A gene set library provided by LINCS

rummageo gene perturbations (122)

A gene set library provided by LINCS

GTEx Aging Signatures 2021 (2)

A gene set library provided by GTEx

RummaGEO DrugPerturbations 2025 (244)

A gene set library provided by LINCS

LINCS L1000 Consensus Median Signatures (1552)

A gene set library provided by LINCS

rummageo chemical perturbations (184)

A gene set library provided by LINCS

Molecular Transducers of Physical Activity Consortium

MoTrPAC Endurance Trained Rats 2023 (1)

A gene set library provided by MoTrPAC

GTEx Tissues V8 2023 (2)

A gene set library provided by GTEx

Knowledge Graph Assertions

Source	Relation	Target	Evidence
SA-1456227 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	0.016283758
JW-7-24-1 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.0051627536
STK-661558 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.0070507834
Cobicistat Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.006578387
AZ10417808 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.008779766
MD-II-008-P Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	0.019734288
SA-1462678 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.014736361
5-alpha-dihydrotestosterone Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	-0.005912127
Nobiletin Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	0.006551631
Glucosamine Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	MSX1 Gene (Entity type)	0.015659401

SA-1456227
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
0.016283758

JW-7-24-1
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.0051627536

STK-661558
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.0070507834

Cobicistat
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.006578387

AZ10417808
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.008779766

MD-II-008-P
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
0.019734288

SA-1462678
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.014736361

5-alpha-dihydrotestosterone
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
-0.005912127

Nobiletin
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
0.006551631

Glucosamine
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
MSX1
Gene (Entity type)
0.015659401

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Knowledge Graph Assertions

	Source	Relation	Target	Evidence
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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.