PALMD (Gene)

Entrez Gene ID: 54873

Description: palmdelphin

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CFDE DD-Knowledge Graph

The CFDE Data Distillery Knowledge Graph contains entities and relationships across the CFDE. View PALMD's neighborhood in the knowledge graph.

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Playbook Workflow Builder: Gene-Centric Workflow

View Gene-Centric information about the gene from a pre-built PWB workflow. View the workflow with PALMD.

CFDE Gene-Centric Appyter

The CFDE Gene Centric Appyter Resolves and Displays Gene-Centric information from CFDE APIs. Execute the Appyter using PALMD.

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GDLPA Landing Pages Links

The Gene and Drug Landing Page Aggregator (GDLPA) finds links to primary and secondary source information from CFDE and other resources. Discover landing pages for PALMD.

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Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with PALMD.

Gene Sets (2287)

LINCS L1000 Chem Pert Consensus Sigs (509)

A gene set library provided by LINCS

ARCHS4 IDG Coexp (3)

A gene set library provided by IDG

KOMP2 Mouse Phenotypes 2022 (1)

A gene set library provided by KOMP2

LINCS L1000 CRISPR KO Consensus Sigs (446)

A gene set library provided by LINCS

rummageo gene perturbations (106)

A gene set library provided by LINCS

RummaGEO DrugPerturbations 2025 (255)

A gene set library provided by LINCS

LINCS L1000 Consensus Median Signatures (768)

A gene set library provided by LINCS

rummageo chemical perturbations (186)

A gene set library provided by LINCS

Molecular Transducers of Physical Activity Consortium

MoTrPAC Endurance Trained Rats 2023 (4)

A gene set library provided by MoTrPAC

GTEx Tissues V8 2023 (6)

A gene set library provided by GTEx

HuBMAP ASCT-B (3)

A gene set library provided by HuBMAP

Knowledge Graph Assertions

Source	Relation	Target	Evidence
Endothelial cell of arteriole Anatomy (Entity type)	Has marker gene in kidney Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)
BAM-7 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	0.01030743
vasa recta descending limb cell Anatomy (Entity type)	Has marker gene in kidney Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)
SA-427543 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	0.007578326
[3-(5H-Dibenzo[a,d]cyclohepten-5-yl)-propyl]-methyl-amine Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	-0.0031924048
SID11113856 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	0.010057399
SA-1472321 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	-0.011110842
KFGENEBIN:PALMD-variant-count CUI KFGENEBIN (Entity type)	Gene has variants Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)
SA-97110 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	0.01134479
Thioperamide Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	PALMD Gene (Entity type)	0.006580697

Endothelial cell of arteriole
Anatomy (Entity type)
Has marker gene in kidney
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)

BAM-7
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
0.01030743

vasa recta descending limb cell
Anatomy (Entity type)
Has marker gene in kidney
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)

SA-427543
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
0.007578326

[3-(5H-Dibenzo[a,d]cyclohepten-5-yl)-propyl]-methyl-amine
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
-0.0031924048

SID11113856
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
0.010057399

SA-1472321
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
-0.011110842

KFGENEBIN:PALMD-variant-count CUI
KFGENEBIN (Entity type)
Gene has variants
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)

SA-97110
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
0.01134479

Thioperamide
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
PALMD
Gene (Entity type)
0.006580697

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Knowledge Graph Assertions

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.