4ebb6f36-0fed-4676-b48c-cea3b3ff5806 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESH5YI3CM

Description:4DNESH5YI3CM: Hi-C on HFF cells - protocol variations - Formaldehyde+DSG, DdeI, HFFc6, (Tier 1) Hi-C experiments on HFFc6 crosslinked with both FA and DSG, digested with DdeI.

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESH5YI3CM

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	10aa2d32-9fd4-46ce-a585-827d8c7810c3 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	fbd0e03b-3711-45c9-9ce8-f8f52c0c121c Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESH5YI3CM
	fc406edb-76eb-4269-ae81-4b567b6314e0 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESH5YI3CM
	4DNFII84FBKM.hic File (Entity type)	A 8.98 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIV4V789H.bw File (Entity type)	A 8.41 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI2K9STD5.bedpe.gz File (Entity type)	A 2.26 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIGBKMVCD.mcool File (Entity type)	A 6.28 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIAULPKVA.bw File (Entity type)	A 320 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIID6RPA8.txt.gz File (Entity type)	A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

10aa2d32-9fd4-46ce-a585-827d8c7810c3

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

fbd0e03b-3711-45c9-9ce8-f8f52c0c121c

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESH5YI3CM

fc406edb-76eb-4269-ae81-4b567b6314e0

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESH5YI3CM

4DNFII84FBKM.hic

File (Entity type)

A 8.98 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIV4V789H.bw

File (Entity type)

A 8.41 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI2K9STD5.bedpe.gz

File (Entity type)

A 2.26 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIGBKMVCD.mcool

File (Entity type)

A 6.28 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIAULPKVA.bw

File (Entity type)

A 320 KB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIID6RPA8.txt.gz

File (Entity type)

A 1.04 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.