N:dataset:0e0a90b4-275f-40d9-b214-b84071bc0456 (Collection)

Id Namespace:

SPARC collection namespace

Identifier Namespace (Entity type)

Dcc Asset:

C2M2 datapackage 202509.zip

Processed File (Entity type)

Dcc:

SPARC

DCC (Entity type)

Persistent Id:https://doi.org/10.26275/pzek-91wx

Description:Details a new technique to image the enteric nervous system (ENS) and other cells that control motility in the human colon in three dimensions, by combining tissue clearing, immunohistochemistry, confocal microscopy, and quantitative image analysis.

Abbreviation:pzek_91wx

Results found

Linked to

	Label	Description
	OT2OD023859 Project (Entity type)	Gastrointestinal (GI) function is regulated by the enteric nervous system (ENS). The ENS contains al...
	N:dataset:0e0a90b4-275f-40d9-b214-b84071bc0456 default Subject (Entity type)	A subject from SPARC produced as part of the OT2OD023859 project
	N:dataset:0e0a90b4-275f-40d9-b214-b84071bc0456 default default Biosample (Entity type)	A biosample from SPARC produced as part of the OT2OD023859 project
	primary Human Colon 3D sub 4585 119 Adult Left Colon 4585 20x anti HucD 488 anti S100B 594 anti PHOX2B 647 4.tif File (Entity type)	A 294 MB file from SPARC produced from OBI:0000185 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4514 80 Adult Right Colon 4514 20x anti HucD 488 anti nNOS 594 anti CHAT 647 3.tif File (Entity type)	A 186 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4506 251 Adult Right Colon 4506 20x anti HucD 594 anti cKit 647 2.tif File (Entity type)	A 133 MB file from SPARC produced from OBI:0002176 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4689 171 Adult Left Colon 4689 20x anti HucD 594 anti calretinin 647 1.tif File (Entity type)	A 95.1 MB file from SPARC produced from OBI:0002176 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4443 6 Adult Left Colon 4443 20x anti HucD 594 anti nNOS 488 anti CHAT 647 6.tif File (Entity type)	A 80.3 MB file from SPARC produced from OBI:0001980 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4514 135 Adult Right Colon 4514 20x anti HucD 488 anti S100B 594 anti PHOX2B 647 2.tif File (Entity type)	A 311 MB file from SPARC produced from OBI:0001986 as part of the OT2OD023859 project
	primary Human Colon 3D sub 4454 27 Adult Left Colon 4454 20x anti HucD 594 anti nNOS 488 anti CHAT 647 2.tif File (Entity type)	A 207 MB file from SPARC produced from OBI:0002119 as part of the OT2OD023859 project

OT2OD023859

Project (Entity type)

Gastrointestinal (GI) function is regulated by the enteric nervous system (ENS). The ENS contains al...

N:dataset:0e0a90b4-275f-40d9-b214-b84071bc0456 default

Subject (Entity type)

A subject from SPARC produced as part of the OT2OD023859 project

N:dataset:0e0a90b4-275f-40d9-b214-b84071bc0456 default default

Biosample (Entity type)

A biosample from SPARC produced as part of the OT2OD023859 project

primary Human Colon 3D sub 4585 119 Adult Left Colon 4585 20x anti HucD 488 anti S100B 594 anti PHOX2B 647 4.tif

File (Entity type)

A 294 MB file from SPARC produced from OBI:0000185 as part of the OT2OD023859 project

primary Human Colon 3D sub 4514 80 Adult Right Colon 4514 20x anti HucD 488 anti nNOS 594 anti CHAT 647 3.tif

File (Entity type)

A 186 MB file from SPARC produced from OBI:0000424 as part of the OT2OD023859 project

primary Human Colon 3D sub 4506 251 Adult Right Colon 4506 20x anti HucD 594 anti cKit 647 2.tif

File (Entity type)

A 133 MB file from SPARC produced from OBI:0002176 as part of the OT2OD023859 project

primary Human Colon 3D sub 4689 171 Adult Left Colon 4689 20x anti HucD 594 anti calretinin 647 1.tif

File (Entity type)

A 95.1 MB file from SPARC produced from OBI:0002176 as part of the OT2OD023859 project

primary Human Colon 3D sub 4443 6 Adult Left Colon 4443 20x anti HucD 594 anti nNOS 488 anti CHAT 647 6.tif

File (Entity type)

A 80.3 MB file from SPARC produced from OBI:0001980 as part of the OT2OD023859 project

primary Human Colon 3D sub 4514 135 Adult Right Colon 4514 20x anti HucD 488 anti S100B 594 anti PHOX2B 647 2.tif

File (Entity type)

A 311 MB file from SPARC produced from OBI:0001986 as part of the OT2OD023859 project

primary Human Colon 3D sub 4454 27 Adult Left Colon 4454 20x anti HucD 594 anti nNOS 488 anti CHAT 647 2.tif

File (Entity type)

A 207 MB file from SPARC produced from OBI:0002119 as part of the OT2OD023859 project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.