98306c0d-fd1d-479b-b2d7-894c4d5d0ad4 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESQMM4EBN

Description:4DNESQMM4EBN: Hi-C on CTCF-AID tagged F123-CASTx129 - CTCF depleted by auxin treatment (0.5 mM, 24.0h) Replicates of F123 CAST X 129 mouse cells containing a genomically modified AID-tagged CTCF treated with Auxin for 24 hours and then prepared for in situ Hi-C

Creation Time:2018-05-31T00:00:00

Abbreviation:4DNESQMM4EBN

Results found

Linked to

	Label	Description
	4871e338-b07d-4665-a00a-357648e5bad6 Project (Entity type)	SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...
	f8ddbc70-a311-490b-b0ef-7549868a059c Subject (Entity type)	A subject from 4DN produced as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4a3044c1-8b05-47a4-ae73-49cf9aa59053 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESQMM4EBN
	d34b2505-bd84-45dd-9df7-f6340ec28b56 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESQMM4EBN
	4DNFIF4Y74JR.hic File (Entity type)	A 2.25 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI6TWSN91.pairs.gz File (Entity type)	A 7.48 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI9CLWJ8B.bed.gz File (Entity type)	A 130 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI7RQTJVY.bw File (Entity type)	A 193 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI2KWDAL6.mcool File (Entity type)	A 1.50 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI1BKJ53V.bw File (Entity type)	A 7.55 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4871e338-b07d-4665-a00a-357648e5bad6

Project (Entity type)

SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...

f8ddbc70-a311-490b-b0ef-7549868a059c

Subject (Entity type)

A subject from 4DN produced as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4a3044c1-8b05-47a4-ae73-49cf9aa59053

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESQMM4EBN

d34b2505-bd84-45dd-9df7-f6340ec28b56

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESQMM4EBN

4DNFIF4Y74JR.hic

File (Entity type)

A 2.25 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI6TWSN91.pairs.gz

File (Entity type)

A 7.48 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI9CLWJ8B.bed.gz

File (Entity type)

A 130 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI7RQTJVY.bw

File (Entity type)

A 193 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI2KWDAL6.mcool

File (Entity type)

A 1.50 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI1BKJ53V.bw

File (Entity type)

A 7.55 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

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CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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