ab929892-9aa6-407e-86e5-bb396102226e (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNEXNEX9DN1

Description:Biological replicate 3, Technical replicate 1 of 4DNES3JX38V5

Creation Time:2017-04-09T00:00:00

Abbreviation:4DNEXNEX9DN1

Results found

Linked to

	Label	Description
	b0b9c607-f8b4-4f02-93f4-9895b461334b Project (Entity type)	4DN-DCIC PHASE 1: This file is the result of a standardized pipeline adopted by the 4DNucleome conso...
	aa6f0d82-16c9-4109-a1f8-3fa0636a3560 Collection (Entity type)	4DNES3JX38V5: Hi-C on GM12878 cells - protocol variations - Preferred protocol - in situ Hi-C on GM1...
	4c8df33f-81cf-4dbc-a54f-022f25d82cd4 Biosample (Entity type)	A biosample from 4DN produced as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIMPW5J27.fastq.gz File (Entity type)	A 14.0 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project
	4DNFIGONO7U7.fastq.gz File (Entity type)	A 14.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project
	4DNFIUC32Q3T.fastq.gz File (Entity type)	A 18.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project
	4DNFI24MDDBZ.pairs.gz File (Entity type)	A 5.13 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIGMREQ23.bam File (Entity type)	A 85.0 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI7XH8QCL.fastq.gz File (Entity type)	A 17.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project

b0b9c607-f8b4-4f02-93f4-9895b461334b

Project (Entity type)

4DN-DCIC PHASE 1: This file is the result of a standardized pipeline adopted by the 4DNucleome conso...

aa6f0d82-16c9-4109-a1f8-3fa0636a3560

Collection (Entity type)

4DNES3JX38V5: Hi-C on GM12878 cells - protocol variations - Preferred protocol - in situ Hi-C on GM1...

4c8df33f-81cf-4dbc-a54f-022f25d82cd4

Biosample (Entity type)

A biosample from 4DN produced as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIMPW5J27.fastq.gz

File (Entity type)

A 14.0 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project

4DNFIGONO7U7.fastq.gz

File (Entity type)

A 14.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project

4DNFIUC32Q3T.fastq.gz

File (Entity type)

A 18.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project

4DNFI24MDDBZ.pairs.gz

File (Entity type)

A 5.13 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIGMREQ23.bam

File (Entity type)

A 85.0 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI7XH8QCL.fastq.gz

File (Entity type)

A 17.3 GB file from 4DN produced from OBI:0003306 as part of the 36a06537 7831 494d b10d 3e9fea931021 project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.