N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0129 UTD-DN0129-SC-VH-run008 (Biosample)

Project:

U19NS130608

Project (Entity type)

Id Namespace:

SPARC sample namespace

Identifier Namespace (Entity type)

Dcc Asset:

C2M2 datapackage 20251215.zip

Processed File (Entity type)

Dcc:

SPARC

DCC (Entity type)

Anatomy:

spinal cord

Anatomy (Entity type)

Results found

Linked to

	Label	Description
	N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c Collection (Entity type)	Single nuclei sequencing of spinal cord from 19 subjects (1 dorsal horn and 1 ventral horn per subje...
	N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0129 Subject (Entity type)	A subject from SPARC produced as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression kmeans 2 clusters clusters.csv File (Entity type)	A 262 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis pca gene expression 10 components features selected.csv File (Entity type)	A 343 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis diffexp gene expression kmeans 2 clusters differential expression.csv File (Entity type)	A 2.60 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis pca gene expression 10 components projection.csv File (Entity type)	A 1.97 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression kmeans 4 clusters clusters.csv File (Entity type)	A 262 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count sample raw feature bc matrix barcodes.tsv.gz File (Entity type)	A 1.73 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression graphclust clusters.csv File (Entity type)	A 263 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project
	primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis umap gene expression 2 components projection.csv File (Entity type)	A 588 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c

Collection (Entity type)

Single nuclei sequencing of spinal cord from 19 subjects (1 dorsal horn and 1 ventral horn per subje...

N:dataset:d4d472d7-e39e-4fa0-8aea-eb1e0d3c957c UTD-DN0129

Subject (Entity type)

A subject from SPARC produced as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression kmeans 2 clusters clusters.csv

File (Entity type)

A 262 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis pca gene expression 10 components features selected.csv

File (Entity type)

A 343 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis diffexp gene expression kmeans 2 clusters differential expression.csv

File (Entity type)

A 2.60 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis pca gene expression 10 components projection.csv

File (Entity type)

A 1.97 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression kmeans 4 clusters clusters.csv

File (Entity type)

A 262 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count sample raw feature bc matrix barcodes.tsv.gz

File (Entity type)

A 1.73 MB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis clustering gene expression graphclust clusters.csv

File (Entity type)

A 263 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

primary sub-UTD-DN0129 sam-UTD-DN0129 sam-UTD-DN0129-SC-VH sam-UTD-DN0129-SC-VH-run008 count analysis umap gene expression 2 components projection.csv

File (Entity type)

A 588 KB file from SPARC produced from OBI:0000424 as part of the U19NS130608 project

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

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