CFDE Workbench
Information PortalData PortalKnowledge Portal
Search
Graph
Enrichment
Cross
Assistant
Data Matrix
Use Cases
Tools & Workflows
Submit
Documentation
CFDE Workbench

L1000 LINCS DCIC 2021 KDC003 HT29 96H N11 ATG4D (Biosample)

Sample Prep Method:

maintaining cell culture

Sample Prep Method (Entity type)
Project:

LINCS-2021

Project (Entity type)
Id Namespace:

Library of Integrated Network-Based Cellular Signatures

Identifier Namespace (Entity type)
Dcc Asset:

datapackage.zip

Processed File (Entity type)
Dcc:

LINCS

DCC (Entity type)
Association Type:

not observed

Disease Association Type (Entity type)
Anatomy:

Intestines

Anatomy (Entity type)
Results found

Linked to

 

Label

Description

 

Subject

HT29

Subject (Entity type)

A subject from LINCS produced as part of the LINCS project

Disease

colon carcinoma

Disease (Entity type)

A colon cancer that has_material_basis_in abnormally proliferating cells derives_from epithelial cel...

Gene

ATG4D

Gene (Entity type)

autophagy related 4D cysteine peptidase

File

L1000 LINCS DCIC KDC003 HT29 96H N11 ATG4D.tsv.gz

File (Entity type)

A 278 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

  • Subject

    HT29

    Subject (Entity type)

    A subject from LINCS produced as part of the LINCS project

  • Disease

    colon carcinoma

    Disease (Entity type)

    A colon cancer that has_material_basis_in abnormally proliferating cells derives_from epithelial cel...

  • Gene

    ATG4D

    Gene (Entity type)

    autophagy related 4D cysteine peptidase

  • File

    L1000 LINCS DCIC KDC003 HT29 96H N11 ATG4D.tsv.gz

    File (Entity type)

    A 278 KB file from LINCS produced from OBI:0002965 as part of the LINCS 2021 project

    • DISPLAY PER PAGE
    CFDE Workbench
    Report a bug
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    @CFDE Workbench 2025
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    Consortium
    About the CFDECF ProgramsCFDE CentersPartnershipsPilot Projects
    Community
    Workbench TutorialTraining & OutreachDocumentationGet QR CodesFunding Opportunities
    Resources
    Data & MetadataToolsChatbotUse CasesPublications
    CFDE Workbench
    Report a bug
    The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.
    @CFDE Workbench 2025
    This repository is under review for potential modification in compliance with Administration directives.