genome architecture mapping assay (Assay Type)

Synonyms:GAM

Description:A DNA sequencing assay designed to analyze 3D chromatin structure without relying on digestion and ligation. The procedure involves cryosectioning samples in random orientation, and then single nuclear profiles are isolated by laser microdissection. Each nuclear profile then undergoes high-throughput sequencing, and subsequent analysis can generate a matrix of inferred proximity between genomic regions.

Results found

Linked to

	Label	Description
	4DNFINQ9KDIC.fastq.gz File (Entity type)	A 128 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFI541YUMD.fastq.gz File (Entity type)	A 104 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFIXGRNTFA.fastq.gz File (Entity type)	A 121 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFI4NHY3R2.fastq.gz File (Entity type)	A 110 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFI9VYVQI1.fastq.gz File (Entity type)	A 261 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFIK6BJXNP.fastq.gz File (Entity type)	A 198 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFIVXCDZQK.fastq.gz File (Entity type)	A 125 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFIQUWXL7Q.fastq.gz File (Entity type)	A 158 MB file from 4DN produced from OBI:0003313 as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project
	4DNFI6229E3E.fastq.gz File (Entity type)	A 90.3 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	4DNFI4O16UY1.fastq.gz File (Entity type)	A 171 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFINQ9KDIC.fastq.gz

File (Entity type)

A 128 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFI541YUMD.fastq.gz

File (Entity type)

A 104 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFIXGRNTFA.fastq.gz

File (Entity type)

A 121 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFI4NHY3R2.fastq.gz

File (Entity type)

A 110 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFI9VYVQI1.fastq.gz

File (Entity type)

A 261 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFIK6BJXNP.fastq.gz

File (Entity type)

A 198 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFIVXCDZQK.fastq.gz

File (Entity type)

A 125 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFIQUWXL7Q.fastq.gz

File (Entity type)

A 158 MB file from 4DN produced from OBI:0003313 as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project

4DNFI6229E3E.fastq.gz

File (Entity type)

A 90.3 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

4DNFI4O16UY1.fastq.gz

File (Entity type)

A 171 MB file from 4DN produced from OBI:0003313 as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

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Community

Resources

@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.