transposase-mediated analysis of chromatin looping assay (Assay Type)

Synonyms:TrAC-Loop

Description:A DNA sequencing assay designed to detect interacting genomic regions. Rather than the traditional Hi-C approach of digestion and proximity ligation, the procedure involves transposase-mediated insertion of an oligonucleotide linker between the pair of interacting regions.

Results found

Linked to

	Label	Description
	4DNFIBL3JC41.fastq.gz File (Entity type)	A 811 MB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFI3AF2455.fastq.gz File (Entity type)	A 1.31 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFIGDGGOKK.bam File (Entity type)	A 10.9 GB file from 4DN produced from OBI:0003309 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIOXRTFJM.fastq.gz File (Entity type)	A 874 MB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFINYCUVKX.fastq.gz File (Entity type)	A 1.67 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFIYUZQRIJ.fastq.gz File (Entity type)	A 1.41 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFIT2Y15DJ.fastq.gz File (Entity type)	A 1.25 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFIV5H3RCO.fastq.gz File (Entity type)	A 1.42 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFIZMI8RBZ.fastq.gz File (Entity type)	A 1.55 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project
	4DNFI6UHAJ72.fastq.gz File (Entity type)	A 1.41 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIBL3JC41.fastq.gz

File (Entity type)

A 811 MB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFI3AF2455.fastq.gz

File (Entity type)

A 1.31 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIGDGGOKK.bam

File (Entity type)

A 10.9 GB file from 4DN produced from OBI:0003309 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIOXRTFJM.fastq.gz

File (Entity type)

A 874 MB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFINYCUVKX.fastq.gz

File (Entity type)

A 1.67 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIYUZQRIJ.fastq.gz

File (Entity type)

A 1.41 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIT2Y15DJ.fastq.gz

File (Entity type)

A 1.25 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIV5H3RCO.fastq.gz

File (Entity type)

A 1.42 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFIZMI8RBZ.fastq.gz

File (Entity type)

A 1.55 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

4DNFI6UHAJ72.fastq.gz

File (Entity type)

A 1.41 GB file from 4DN produced from OBI:0003309 as part of the 0116e3c0 fb5a 491c a9c2 8e17df70bfc1 project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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