4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI (4DN Loop)

Description: A 4dn loop in the knowledge graph

Analyze

CFDE DD-Knowledge Graph

The CFDE Data Distillery Knowledge Graph contains entities and relationships across the CFDE. View 4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI's neighborhood in the knowledge graph.

Submit

Knowledge Graph Assertions

Source	Relation	Target
in situ Hi-C on HCT116 cells (containing AID-tagged WAPL) untreated.HCT116.WT.Cremins 4DN File (Entity type)	File has loop Knowledge Graph Relation (Entity type)	4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)	Loop us start Knowledge Graph Relation (Entity type)	HSCLO:chr3.168219001-168220000 CUI HSCLO (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)	Loop has qvalue bin Knowledge Graph Relation (Entity type)	4DNQ:1e-4.1e-3 CUI 4DN QVal Bin (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)	Loop us end Knowledge Graph Relation (Entity type)	HSCLO:chr3.168239001-168240000 CUI HSCLO (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)	Loop ds end Knowledge Graph Relation (Entity type)	HSCLO:chr3.168559001-168560000 CUI HSCLO (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI 4DN Loop (Entity type)	Loop ds start Knowledge Graph Relation (Entity type)	HSCLO:chr3.168479001-168480000 CUI HSCLO (Entity type)

in situ Hi-C on HCT116 cells (containing AID-tagged WAPL) untreated.HCT116.WT.Cremins
4DN File (Entity type)
File has loop
Knowledge Graph Relation (Entity type)
4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)

4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)
Loop us start
Knowledge Graph Relation (Entity type)
HSCLO:chr3.168219001-168220000 CUI
HSCLO (Entity type)

4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)
Loop has qvalue bin
Knowledge Graph Relation (Entity type)
4DNQ:1e-4.1e-3 CUI
4DN QVal Bin (Entity type)

4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)
Loop us end
Knowledge Graph Relation (Entity type)
HSCLO:chr3.168239001-168240000 CUI
HSCLO (Entity type)

4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)
Loop ds end
Knowledge Graph Relation (Entity type)
HSCLO:chr3.168559001-168560000 CUI
HSCLO (Entity type)

4DNL:4DNFIOQLL854.chr3.168220000-168240000.chr3.168480000-168560000 CUI
4DN Loop (Entity type)
Loop ds start
Knowledge Graph Relation (Entity type)
HSCLO:chr3.168479001-168480000 CUI
HSCLO (Entity type)

DISPLAY PER PAGE

Knowledge Graph Assertions

	Source	Relation	Target	Evidence
Loading results...

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.