Human BioMolecular Atlas Program (HuBMAP)
The goal of the Human BioMolecular Atlas Program (HuBMAP) is to develop an open and global platform to map healthy cells in the human body. In humans, the proper functioning of organs and tissues is dependent on the interaction, spatial organization, and specialization of all our cells. Scientists estimate there are 37 trillion cells in an adult human body, so determining the function and relationship among these cells is a monumental undertaking. Using the latest molecular and cellular biology technologies, HuBMAP researchers are studying the connections that cells have with each other throughout the body. HuBMAP will build the framework necessary to construct the tools, resources, and cell atlases needed to determine how the relationships between cells can affect the health of an individual. (Retrieved from the NIH Common Fund site)
TRAINING & OUTREACH
The HuBMAP JumpStart Fellowship
The HuBMAP JumpStart fellowship offers junior investigators working on human atlasing projects the opportunity to take a leadership role in conducting synergistic, collaborative research projects within the HuBMAP consortium. The goal of this program is to create a mentored, career development opportunity for promising junior researchers, and to promote collaboration among HuBMAP and the atlas-building community.
Starts: June 1, 2025
Metadata and Processed Data Files
C2M2
1 Current File(s) | 16 Archived File(s)
1 Current File(s)
16 Archived File(s)
Modified 3/6/2025
Current
| Filename | Creator | Filesize | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|---|
| HuBMAP_C2M2_Spring_2025.zip | HuBMAP | 1.0 Gb | 3/6/2025 |
Archived
| Filename | Creator | Filesize | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|---|
| HuBMAP_C2M2_Spring_2025.zip | HuBMAP | 1.0 Gb | 3/4/2025 | ||
| HuBMAP_Dec_2024.zip | HuBMAP | 1.0 Gb | 12/16/2024 | ||
| HuBMAP_December_2024.zip | HuBMAP | 1.0 Gb | 12/16/2024 | ||
| HuBMAP_Dec_2024-fixed.zip | DRC | 1.0 Gb | 12/16/2024 | ||
| 20241202-submission.zip | HuBMAP | 1.0 Gb | 12/4/2024 | ||
| submission_validated.zip | HuBMAP | 1.0 Gb | 7/3/2024 | ||
| submission.zip | HuBMAP | 1.0 Gb | 6/13/2024 | ||
| hubmap-test-submission.zip | HuBMAP | 1.0 Gb | 4/26/2024 | ||
| datapackage.zip | HuBMAP | 1.0 Gb | 4/3/2024 | ||
| datapackage.zip | HuBMAP | 1.0 Gb | 9/17/2023 | ||
| datapackage.zip | HuBMAP | 726.1 Mb | 3/31/2023 | ||
| datapackage.zip | HuBMAP | 92.5 Mb | 6/19/2022 | ||
| datapackage.zip | HuBMAP | 45.8 Mb | 1/15/2022 | ||
| datapackage.zip | HuBMAP | 16.6 Mb | 10/15/2021 | ||
| datapackage.zip | HuBMAP | 16.4 Mb | 6/23/2021 | ||
| datapackage.zip | HuBMAP | 27.0 Kb | 3/19/2021 |
XMT
1 Current File(s) | 0 Archived File(s)
1 Current File(s)
0 Archived File(s)
Modified 3/21/2025
Current
| Filename | Creator | Filesize | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|---|
| HuBMAP_ASCT-B.gmt | DRC | 32.1 Kb | 3/21/2025 |
Archived
None Available
Attribute Tables
0 Available Files
Current
None Available
Archived
None Available
Knowledge Graph Assertions
1 Current File(s) | 0 Archived File(s)
1 Current File(s)
0 Archived File(s)
Modified 5/8/2024
Current
| Filename | Creator | Filesize | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|---|
| HuBMAP.zip | HuBMAP | 69.3 Kb | 5/8/2024 |
Archived
None Available
Interoperability Assets
ETL Scripts
0 Available Files
Current
None Available
Archived
None Available
API Specifications
3 Current File(s) | 0 Archived File(s)
3 Current File(s)
0 Archived File(s)
Modified 6/10/2024
Current
| Name | Creator | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|
HuBMAP Entity API (SmartAPI) | HuBMAP | 4/26/2024 | ||
HuBMAP Entity API (SmartAPI) | HuBMAP | 6/10/2024 | ||
HuBMAP Search API (SmartAPI) | HuBMAP | 6/10/2024 |
Archived
None Available
Entity Pages
0 Available Files
Current
None Available
Archived
None Available
PWB Metanodes
0 Available Files
Current
None Available
Archived
None Available
Chatbot Specifications
0 Available Files
Current
None Available
Archived
None Available
Apps URLs
3 Current File(s) | 0 Archived File(s)
3 Current File(s)
0 Archived File(s)
Modified 6/10/2024
Current
| Name | Creator | Date Modified | DCC Approved | DRC Approved |
|---|---|---|---|---|
| Human Reference Atlas | HuBMAP | 6/10/2024 | ||
| HRA Exploration | HuBMAP | 6/10/2024 | ||
| HuBMAP Data Portal | HuBMAP | 6/10/2024 |
Archived
None Available