bulk assay for transposase-accessible chromatin using sequencing (Sample Prep Method)

Synonyms:bulk ATAC-seq

Description:An assay for transposase-accessible chromatin using sequencing in which the sample that is sequenced is derived from a collection of cells, such as a tissue sample or entire cell culture, and therefore provides results representative of the aggregate of sample cells.

Results found

Linked to

	Label	Description
	90258017011 R1.trim.bam File (Entity type)	A 4.60 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90292017011 R1.trim.bam File (Entity type)	A 4.70 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90232016602 Biosample (Entity type)	A biosample from MoTrPAC produced as part of the motrpac project
	90239015802 R1.fastq.gz File (Entity type)	A 1.95 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90430017003 R1.trim.bam File (Entity type)	A 4.53 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90248016602 R1.fastq.gz File (Entity type)	A 856 MB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90422016805 R1.fastq.gz File (Entity type)	A 1.35 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90444015505 R2.fastq.gz File (Entity type)	A 1.21 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project
	90449016904 Biosample (Entity type)	A biosample from MoTrPAC produced as part of the motrpac project
	90585016805 R1.fastq.gz File (Entity type)	A 794 MB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90258017011 R1.trim.bam

File (Entity type)

A 4.60 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90292017011 R1.trim.bam

File (Entity type)

A 4.70 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90232016602

Biosample (Entity type)

A biosample from MoTrPAC produced as part of the motrpac project

90239015802 R1.fastq.gz

File (Entity type)

A 1.95 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90430017003 R1.trim.bam

File (Entity type)

A 4.53 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90248016602 R1.fastq.gz

File (Entity type)

A 856 MB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90422016805 R1.fastq.gz

File (Entity type)

A 1.35 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90444015505 R2.fastq.gz

File (Entity type)

A 1.21 GB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

90449016904

Biosample (Entity type)

A biosample from MoTrPAC produced as part of the motrpac project

90585016805 R1.fastq.gz

File (Entity type)

A 794 MB file from MoTrPAC produced from OBI:0003089 as part of the motrpac project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.