PR000853 (Project)

Description:Untargeted metabolomics of host-associated samples has yielded insights into mechanisms by which microbes modulate health. However, data interpretation is challenged by the complexity of origins of the small molecules measured, which can come from the host, microbes that live within the host, or from other exposures such as diet or the environment. We address this challenge through development of AMON: Annotation of Metabolite Origins via Networks. AMON is an open-source bioinformatics application that can be used to annotate which compounds in the metabolome could have been produced by bacteria present or the host, to evaluate pathway enrichment of host verses microbial metabolites, and to visualize which compounds may have been produced by host versus microbial enzymes in KEGG pathway maps.
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Project

Metabolomics

Subject

A subject from Metabolomics produced as part of the PR000853 project

File

A 14.8 GB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project

File

A 1.27 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project

File

A 1.03 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project

File

A 1.15 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project

File

A 1.44 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project

Biosample

A biosample from Metabolomics produced as part of the PR000853 project

Biosample

A biosample from Metabolomics produced as part of the PR000853 project

Biosample

A biosample from Metabolomics produced as part of the PR000853 project


  • Subject

    A subject from Metabolomics produced as part of the PR000853 project


  • File

    A 14.8 GB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project


  • File

    A 1.27 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project


  • File

    A 1.03 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project


  • File

    A 1.15 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project


  • File

    A 1.44 MB file from Metabolomics produced from OBI:0003097 as part of the PR000853 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR000853 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR000853 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR000853 project

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