L1000-Phase1 (Project)

Id Namespace:

Library of Integrated Network-Based Cellular Signatures

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Persistent Id:https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE92742

Description:The Library of Integrated Cellular Signatures (LINCS) is an NIH program which funds the generation of perturbational profiles across multiple cell and perturbation types, as well as read-outs, at a massive scale. The LINCS Center for Transcriptomics at the Broad Institute uses the L1000 high-throughput gene-expression assay to build a Connectivity Map which seeks to enable the discovery of functional connections between drugs, genes and diseases through analysis of patterns induced by common gene-expression changes. These files represent L1000 data generated during the LINCS Pilot Phase (2012-2015), as well as profiles generated for more specific purposes, such as assay development and validation projects or testing custom compounds or non-standard cell lines.

Abbreviation:CMAP1

Results found

Linked to

	Label	Description
	LINCS Project (Entity type)	The Library of Integrated Network-Based Cellular Signatures (LINCS) Program aims to create a network...
	L1000 LINCS DCIC CPC004 PC3 24H E09 dehydrocholate 10.00um.tsv.gz File (Entity type)	A 450 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	L1000 LINCS DCIC KDB006 A375 96H B16 MARK4 Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 Phase1 project
	L1000 LINCS DCIC ERGK010 VCAP 120H A23 CSNK2A2.tsv.gz File (Entity type)	A 278 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	L1000 LINCS DCIC DER001 HT29 96H C12 NDUFAF4 Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 Phase1 project
	L1000 LINCS DCIC KDC007 VCAP 120H D20 LIAS Biosample (Entity type)	A biosample from LINCS produced as part of the L1000 Phase1 project
	L1000 LINCS DCIC CPC012 PC3 6H C06 BRD-K18074178 10.00um.tsv.gz File (Entity type)	A 371 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	L1000 LINCS DCIC LJP001 MCF7 24H D12 HG-5-88-01 0.08um.tsv.gz File (Entity type)	A 213 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	L1000 LINCS DCIC CPC012 HCC515 6H C06 BRD-K18074178 10.00um.tsv.gz File (Entity type)	A 293 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project
	L1000 LINCS DCIC TAK003 A375 96H A24 HLA-A.tsv.gz File (Entity type)	A 277 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

LINCS

Project (Entity type)

The Library of Integrated Network-Based Cellular Signatures (LINCS) Program aims to create a network...

L1000 LINCS DCIC CPC004 PC3 24H E09 dehydrocholate 10.00um.tsv.gz

File (Entity type)

A 450 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

L1000 LINCS DCIC KDB006 A375 96H B16 MARK4

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 Phase1 project

L1000 LINCS DCIC ERGK010 VCAP 120H A23 CSNK2A2.tsv.gz

File (Entity type)

A 278 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

L1000 LINCS DCIC DER001 HT29 96H C12 NDUFAF4

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 Phase1 project

L1000 LINCS DCIC KDC007 VCAP 120H D20 LIAS

Biosample (Entity type)

A biosample from LINCS produced as part of the L1000 Phase1 project

L1000 LINCS DCIC CPC012 PC3 6H C06 BRD-K18074178 10.00um.tsv.gz

File (Entity type)

A 371 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

L1000 LINCS DCIC LJP001 MCF7 24H D12 HG-5-88-01 0.08um.tsv.gz

File (Entity type)

A 213 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

L1000 LINCS DCIC CPC012 HCC515 6H C06 BRD-K18074178 10.00um.tsv.gz

File (Entity type)

A 293 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

L1000 LINCS DCIC TAK003 A375 96H A24 HLA-A.tsv.gz

File (Entity type)

A 277 KB file from LINCS produced from OBI:0002965 as part of the L1000 Phase1 project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.