PR001803 (Project)

Description:Customization of deuterated biomolecules is vital for many advanced biological experiments, including neutron scattering. However, because it is challenging to control the proportion and regiospecificity of deuterium incorporation in live systems, often only two or three synthetic lipids are mixed together to form simplistic model membranes. This limits the applicability and biological accuracy of the results generated with these synthetic membranes. Despite some limited prior examination of deuterating E. coli lipids in vivo, this approach has not been widely implemented. Here, an extensive mass spectrometry-based profiling of E. coli phospholipid deuteration states with several different growth media was performed and a computational method to describe deuterium distributions with a one-number summary is introduced. The deuteration states of thirty-six lipid species were quantitatively profiled in fifteen different growth conditions and tandem mass spectrometry was used to reveal deuterium localization. Regressions were employed to enable the prediction of lipid deuteration for untested conditions. Small-angle neutron scattering was performed on select deuterated lipid samples, which validated the deuteration states calculated from the mass spectral data. Based on these experiments, guidelines for the design of specifically deuterated phospholipids are described. This unlocks even greater capabilities from neutron-based techniques, enabling experiments that were formerly impossible.
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Metabolomics

Subject

A subject from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project

Biosample

A biosample from Metabolomics produced as part of the PR001803 project


  • Subject

    A subject from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project


  • Biosample

    A biosample from Metabolomics produced as part of the PR001803 project

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