AtopDerm (Project)

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Description:The goal of this project was to investigate the skin microbiota of atopic dermatitis (AD) patients at specific timepoints (quiescence, disease flares, and post-treatment) to examine how disease state correlated with changes in the skin microflora. Bacterial diversity associated with AD was examined using a 16S rRNA survey and later broadened to include fungi, viruses, archaea and mites. In addition, bacteria were cultured on a wide variety of media and isolates representing both abundant and novel species were selected for whole genome sequencing. To characterize fungal diversity, two phylogenetic markers within the rDNA region were utilized: 18S rRNA and the Intervening Internal Transcribed Spacer (ITS) region. Full microbial diversity was explored with shotgun metagenomic sequencing.

Abbreviation:AtopDerm

Results found

Linked to

	Label	Description
	PRJNA46333 1167 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1171 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1170 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1179 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1178 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1003 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1176 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1164 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1051 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project
	PRJNA46333 1166 Subject (Entity type)	A subject from HMP produced as part of the AtopDerm project