GSE168171 GSE168173 DDX41 knockdown U2OS 0 v 1 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE168171_GSE168173_DDX41 knockdown_U2OS_0_v_1_human_dn.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE168171_GSE168173_DDX41 knockdown_U2OS_0_v_1_human_dn.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE168171_GSE168173_DDX41 knockdown_U2OS_0_v_1_human_dn.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE168171_GSE168173_DDX41 knockdown_U2OS_0_v_1_human_dn.

Results found

Linked to

	Label	Description
	CXCL14 Gene (Entity type)	C-X-C motif chemokine ligand 14
	SFRP1 Gene (Entity type)	secreted frizzled related protein 1
	KRT14 Gene (Entity type)	keratin 14
	SERPINA1 Gene (Entity type)	serpin family A member 1
	CSTA Gene (Entity type)	cystatin A
	CA12 Gene (Entity type)	carbonic anhydrase 12
	IGFBP5 Gene (Entity type)	insulin like growth factor binding protein 5
	GJA1 Gene (Entity type)	gap junction protein alpha 1
	RGCC Gene (Entity type)	regulator of cell cycle
	LEF1 Gene (Entity type)	lymphoid enhancer binding factor 1

CXCL14

Gene (Entity type)

C-X-C motif chemokine ligand 14

SFRP1

Gene (Entity type)

secreted frizzled related protein 1

KRT14

Gene (Entity type)

keratin 14

SERPINA1

Gene (Entity type)

serpin family A member 1

CSTA

Gene (Entity type)

cystatin A

CA12

Gene (Entity type)

carbonic anhydrase 12

IGFBP5

Gene (Entity type)

insulin like growth factor binding protein 5

GJA1

Gene (Entity type)

gap junction protein alpha 1

RGCC

Gene (Entity type)

regulator of cell cycle

LEF1

Gene (Entity type)

lymphoid enhancer binding factor 1

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.