GSE128255 NDP knockdown stem cell 3 v 0 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with .

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with .

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with .

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with .

Results found

Linked to

	Label	Description
	CDC20 Gene (Entity type)	cell division cycle 20
	EIF5A Gene (Entity type)	eukaryotic translation initiation factor 5A
	PTPN12 Gene (Entity type)	protein tyrosine phosphatase non-receptor type 12
	INSIG1 Gene (Entity type)	insulin induced gene 1
	E2F2 Gene (Entity type)	E2F transcription factor 2
	PCNA Gene (Entity type)	proliferating cell nuclear antigen
	TM4SF1 Gene (Entity type)	transmembrane 4 L six family member 1
	LSM5 Gene (Entity type)	LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated
	FABP5 Gene (Entity type)	fatty acid binding protein 5
	SNHG1 Gene (Entity type)	small nucleolar RNA host gene 1

CDC20

Gene (Entity type)

cell division cycle 20

EIF5A

Gene (Entity type)

eukaryotic translation initiation factor 5A

PTPN12

Gene (Entity type)

protein tyrosine phosphatase non-receptor type 12

INSIG1

Gene (Entity type)

insulin induced gene 1

E2F2

Gene (Entity type)

E2F transcription factor 2

PCNA

Gene (Entity type)

proliferating cell nuclear antigen

TM4SF1

Gene (Entity type)

transmembrane 4 L six family member 1

LSM5

Gene (Entity type)

LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated

FABP5

Gene (Entity type)

fatty acid binding protein 5

SNHG1

Gene (Entity type)

small nucleolar RNA host gene 1

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.