GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 11 v 12 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_11_v_12_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_11_v_12_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_11_v_12_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE57871_GLI1_PSMD13 knockdown_HCT 116_Vorinostat_11_v_12_human_up.

Results found

Linked to

	Label	Description
	CA2 Gene (Entity type)	carbonic anhydrase 2
	AQP3 Gene (Entity type)	aquaporin 3 (Gill blood group)
	CLU Gene (Entity type)	clusterin
	ATF3 Gene (Entity type)	activating transcription factor 3
	KRT19 Gene (Entity type)	keratin 19
	FABP4 Gene (Entity type)	fatty acid binding protein 4
	SLPI Gene (Entity type)	secretory leukocyte peptidase inhibitor
	DKK1 Gene (Entity type)	dickkopf Wnt signaling pathway inhibitor 1
	IFIT1 Gene (Entity type)	interferon induced protein with tetratricopeptide repeats 1
	AREG Gene (Entity type)	amphiregulin

CA2

Gene (Entity type)

carbonic anhydrase 2

AQP3

Gene (Entity type)

aquaporin 3 (Gill blood group)

CLU

Gene (Entity type)

clusterin

ATF3

Gene (Entity type)

activating transcription factor 3

KRT19

Gene (Entity type)

keratin 19

FABP4

Gene (Entity type)

fatty acid binding protein 4

SLPI

Gene (Entity type)

secretory leukocyte peptidase inhibitor

DKK1

Gene (Entity type)

dickkopf Wnt signaling pathway inhibitor 1

IFIT1

Gene (Entity type)

interferon induced protein with tetratricopeptide repeats 1

AREG

Gene (Entity type)

amphiregulin

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.