GSE57871 GLI1 PSMD13 knockdown HCT 116 Vorinostat 1 v 10 human dn (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with .

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with .

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with .

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with .

Results found

Linked to

	Label	Description
	GSK3A Gene (Entity type)	glycogen synthase kinase 3 alpha
	PHLDA1 Gene (Entity type)	pleckstrin homology like domain family A member 1
	RRS1 Gene (Entity type)	regulator of ribosome synthesis 1
	MRPS18B Gene (Entity type)	mitochondrial ribosomal protein S18B
	SNHG16 Gene (Entity type)	small nucleolar RNA host gene 16
	TGFBR2 Gene (Entity type)	transforming growth factor beta receptor 2
	DANCR Gene (Entity type)	differentiation antagonizing non-protein coding RNA
	PLK1 Gene (Entity type)	polo like kinase 1
	ZBED1 Gene (Entity type)	zinc finger BED-type containing 1
	KIF20A Gene (Entity type)	kinesin family member 20A

GSK3A

Gene (Entity type)

glycogen synthase kinase 3 alpha

PHLDA1

Gene (Entity type)

pleckstrin homology like domain family A member 1

RRS1

Gene (Entity type)

regulator of ribosome synthesis 1

MRPS18B

Gene (Entity type)

mitochondrial ribosomal protein S18B

SNHG16

Gene (Entity type)

small nucleolar RNA host gene 16

TGFBR2

Gene (Entity type)

transforming growth factor beta receptor 2

DANCR

Gene (Entity type)

differentiation antagonizing non-protein coding RNA

PLK1

Gene (Entity type)

polo like kinase 1

ZBED1

Gene (Entity type)

zinc finger BED-type containing 1

KIF20A

Gene (Entity type)

kinesin family member 20A

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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