GSE128255 NDP knockdown stem cell 1 v 0 human up (Gene Set)

Dcc Asset:

rummageo gene perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE128255_NDP knockdown_stem cell_1_v_0_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE128255_NDP knockdown_stem cell_1_v_0_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE128255_NDP knockdown_stem cell_1_v_0_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE128255_NDP knockdown_stem cell_1_v_0_human_up.

Results found

Linked to

	Label	Description
	CA2 Gene (Entity type)	carbonic anhydrase 2
	CLU Gene (Entity type)	clusterin
	PROM1 Gene (Entity type)	prominin 1
	HMGCS1 Gene (Entity type)	3-hydroxy-3-methylglutaryl-CoA synthase 1
	TUBB2A Gene (Entity type)	tubulin beta 2A class IIa
	TLR4 Gene (Entity type)	toll like receptor 4
	BASP1 Gene (Entity type)	brain abundant membrane attached signal protein 1
	IRS2 Gene (Entity type)	insulin receptor substrate 2
	FABP5 Gene (Entity type)	fatty acid binding protein 5
	GPM6B Gene (Entity type)	glycoprotein M6B

CA2

Gene (Entity type)

carbonic anhydrase 2

CLU

Gene (Entity type)

clusterin

PROM1

Gene (Entity type)

prominin 1

HMGCS1

Gene (Entity type)

3-hydroxy-3-methylglutaryl-CoA synthase 1

TUBB2A

Gene (Entity type)

tubulin beta 2A class IIa

TLR4

Gene (Entity type)

toll like receptor 4

BASP1

Gene (Entity type)

brain abundant membrane attached signal protein 1

IRS2

Gene (Entity type)

insulin receptor substrate 2

FABP5

Gene (Entity type)

fatty acid binding protein 5

GPM6B

Gene (Entity type)

glycoprotein M6B

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.