Lymph node CT1 Lymphatic Endothelial Cell-Subcapsular Sinus Floor (Gene Set)

Dcc Asset:

HuBMAP ASCT-B.gmt

Processed File (Entity type)

Dcc:

HuBMAP

DCC (Entity type)

Description:ACKR1

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with Lymph node_CT1_Lymphatic Endothelial Cell-Subcapsular Sinus Floor.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with Lymph node_CT1_Lymphatic Endothelial Cell-Subcapsular Sinus Floor.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with Lymph node_CT1_Lymphatic Endothelial Cell-Subcapsular Sinus Floor.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with Lymph node_CT1_Lymphatic Endothelial Cell-Subcapsular Sinus Floor.

Results found

Linked to

	Label	Description
	CD9 Gene (Entity type)	CD9 molecule
	LYZ Gene (Entity type)	lysozyme
	CAV1 Gene (Entity type)	caveolin 1
	CXCL1 Gene (Entity type)	C-X-C motif chemokine ligand 1
	CCL20 Gene (Entity type)	C-C motif chemokine ligand 20
	NT5E Gene (Entity type)	5'-nucleotidase ecto
	CXCL5 Gene (Entity type)	C-X-C motif chemokine ligand 5
	MFAP4 Gene (Entity type)	microfibril associated protein 4
	THY1 Gene (Entity type)	Thy-1 cell surface antigen
	ICAM1 Gene (Entity type)	intercellular adhesion molecule 1

CD9

Gene (Entity type)

CD9 molecule

LYZ

Gene (Entity type)

lysozyme

CAV1

Gene (Entity type)

caveolin 1

CXCL1

Gene (Entity type)

C-X-C motif chemokine ligand 1

CCL20

Gene (Entity type)

C-C motif chemokine ligand 20

NT5E

Gene (Entity type)

5'-nucleotidase ecto

CXCL5

Gene (Entity type)

C-X-C motif chemokine ligand 5

MFAP4

Gene (Entity type)

microfibril associated protein 4

THY1

Gene (Entity type)

Thy-1 cell surface antigen

ICAM1

Gene (Entity type)

intercellular adhesion molecule 1

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CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.