GSE85880 GSE85881 tretinoin cardiac muscle cell 0 v 1 human up (Gene Set)

Dcc Asset:

rummageo chemical perturbations.gmt

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Analyze

Playbook Workflow Builder: Gene Set Enrichment

Perform Gene Set Enrichment with this gene set against Common Fund program's gene sets, identifying significant overlaps using a pre-built PWB workflow. Run the workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_up.

GeneSetCart

GeneSetCart helps you to fetch gene sets from various data sources, augment, combine with set operations, visualize and analyze these gene sets in a single session. Start a new session with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_up.

CFDE Gene Set Enrichment (GSE)

CFDE-GSE illuminates connections between the input gene set and various CF gene sets that overlap with the queried gene set. Query CFDE-GSE with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_up.

Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with GSE85880_GSE85881_tretinoin_cardiac muscle cell_0_v_1_human_up.

Results found

Linked to

	Label	Description
	AQP3 Gene (Entity type)	aquaporin 3 (Gill blood group)
	CLU Gene (Entity type)	clusterin
	ATF3 Gene (Entity type)	activating transcription factor 3
	IRS2 Gene (Entity type)	insulin receptor substrate 2
	GLUL Gene (Entity type)	glutamate-ammonia ligase
	MMP12 Gene (Entity type)	matrix metallopeptidase 12
	FHL1 Gene (Entity type)	four and a half LIM domains 1
	STEAP1 Gene (Entity type)	STEAP family member 1
	SPON1 Gene (Entity type)	spondin 1
	NRCAM Gene (Entity type)	neuronal cell adhesion molecule

AQP3

Gene (Entity type)

aquaporin 3 (Gill blood group)

CLU

Gene (Entity type)

clusterin

ATF3

Gene (Entity type)

activating transcription factor 3

IRS2

Gene (Entity type)

insulin receptor substrate 2

GLUL

Gene (Entity type)

glutamate-ammonia ligase

MMP12

Gene (Entity type)

matrix metallopeptidase 12

FHL1

Gene (Entity type)

four and a half LIM domains 1

STEAP1

Gene (Entity type)

STEAP family member 1

SPON1

Gene (Entity type)

spondin 1

NRCAM

Gene (Entity type)

neuronal cell adhesion molecule

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@CFDE Workbench 2026

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2026

This repository is under review for potential modification in compliance with Administration directives.