APOB (Gene)

Entrez Gene ID: 338

Description: apolipoprotein B

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CFDE DD-Knowledge Graph

The CFDE Data Distillery Knowledge Graph contains entities and relationships across the CFDE. View APOB's neighborhood in the knowledge graph.

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Playbook Workflow Builder: Gene-Centric Workflow

View Gene-Centric information about the gene from a pre-built PWB workflow. View the workflow with APOB.

CFDE Gene-Centric Appyter

The CFDE Gene Centric Appyter Resolves and Displays Gene-Centric information from CFDE APIs. Execute the Appyter using APOB.

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GDLPA Landing Pages Links

The Gene and Drug Landing Page Aggregator (GDLPA) finds links to primary and secondary source information from CFDE and other resources. Discover landing pages for APOB.

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Playbook Workflow Builder

The Playbook Workflow Builder helps you interactively construct workflows leveraging CFDE APIs without code. Start a new workflow with APOB.

Gene Sets (2961)

LINCS L1000 Chem Pert Consensus Sigs (723)

A gene set library provided by LINCS

ARCHS4 IDG Coexp (2)

A gene set library provided by IDG

GlyGen Glycosylated Proteins 2022 (60)

A gene set library provided by GlyGen

LINCS L1000 CRISPR KO Consensus Sigs (785)

A gene set library provided by LINCS

rummageo gene perturbations (25)

A gene set library provided by LINCS

GTEx Aging Signatures 2021 (11)

A gene set library provided by GTEx

RummaGEO DrugPerturbations 2025 (114)

A gene set library provided by LINCS

LINCS L1000 Consensus Median Signatures (1168)

A gene set library provided by LINCS

rummageo chemical perturbations (59)

A gene set library provided by LINCS

Molecular Transducers of Physical Activity Consortium

MoTrPAC Endurance Trained Rats 2023 (8)

A gene set library provided by MoTrPAC

GTEx Tissues V8 2023 (6)

A gene set library provided by GTEx

Knowledge Graph Assertions

Source	Relation	Target	Evidence
SA-96805 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	-0.017321086
BJM-CSC-15 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	-0.007781296
SA-103021 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	-0.013289365
vismodegib Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	0.0034473597
AZ10417808 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	0.008894964
JAS07-002 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	-0.01323919
1-Benzylimidazole Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	0.0127801215
SA-243423 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	0.014573406
SA-1456443 Compound (Entity type)	Positively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	0.011172187
GTP-14564 Compound (Entity type)	Negatively regulates Knowledge Graph Relation (Entity type)	APOB Gene (Entity type)	-0.006464806

SA-96805
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
-0.017321086

BJM-CSC-15
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
-0.007781296

SA-103021
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
-0.013289365

vismodegib
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
0.0034473597

AZ10417808
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
0.008894964

JAS07-002
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
-0.01323919

1-Benzylimidazole
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
0.0127801215

SA-243423
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
0.014573406

SA-1456443
Compound (Entity type)
Positively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
0.011172187

GTP-14564
Compound (Entity type)
Negatively regulates
Knowledge Graph Relation (Entity type)
APOB
Gene (Entity type)
-0.006464806

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Knowledge Graph Assertions

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.