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MDD ATACseq Level3.csv (File)

Project:

MCF10A-MDD

Project (Entity type)

Id Namespace:

Library of Integrated Network-Based Cellular Signatures

Identifier Namespace (Entity type)

File Format:

CSV

File Format (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Data Type:

Count matrix

Data Type (Entity type)

Assay Type:

assay for transposase-accessible chromatin using sequencing

Assay Type (Entity type)

Uncompressed Size In Bytes:88.3 MB

Size In Bytes:88.3 MB

Sha256:4ce08b36b5aaf4b990be85c000a3f67b2177765b13910d5ffdb3e5e59c0f97e1

Persistent Id:https://www.synapse.org/#!Synapse:syn18485480.5

Mime Type:text/csv

Md5:51acecd84377e854b80b92694427abad

Filename:MDD_ATACseq_Level3.csv

Creation Time:2019-08-08T00:00:00

Access Url:

https://www.synapse.org/#!Synapse:syn18485480.5

Results found

Linked to

	Label	Description
	MCF10A Subject (Entity type)	A subject from LINCS produced as part of the LINCS project
	HGF-40ngPERml 48h RepC CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	BMP2-20ngPERml EGF-20ngPERml 24h RepA CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	IFNG-20ngPERml EGF-20ngPERml 24h RepC CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	CTRL-0ngPERml 0h RepC CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	HGF-40ngPERml 48h RepA CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	PBS-0ngPERml 24h RepA CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	BMP2-20ngPERml EGF-20ngPERml 24h RepC CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	PBS-0ngPERml 48h RepB CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project
	EGF-10ngPERml 24h RepA CollectionC1 Biosample (Entity type)	A biosample from LINCS produced as part of the MCF10A MDD project

MCF10A

Subject (Entity type)

A subject from LINCS produced as part of the LINCS project

HGF-40ngPERml 48h RepC CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

BMP2-20ngPERml EGF-20ngPERml 24h RepA CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

IFNG-20ngPERml EGF-20ngPERml 24h RepC CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

CTRL-0ngPERml 0h RepC CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

HGF-40ngPERml 48h RepA CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

PBS-0ngPERml 24h RepA CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

BMP2-20ngPERml EGF-20ngPERml 24h RepC CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

PBS-0ngPERml 48h RepB CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

EGF-10ngPERml 24h RepA CollectionC1

Biosample (Entity type)

A biosample from LINCS produced as part of the MCF10A MDD project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.