4c16e855-188f-405f-aed3-393d2ed446a9 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNES2Y6YG9E

Description:4DNES2Y6YG9E: Hi-C on Sox2 tagged F123 cells - 2 CTCF site region between Sox2 and SE Replicates of in situ-Hi-C on Sox2 tagged F123 ES cells wih 2 CTCF binding sites introduced between Sox2 and its Super Enhancer

Creation Time:2020-09-08T00:00:00

Abbreviation:4DNES2Y6YG9E

Results found

Linked to

	Label	Description
	4871e338-b07d-4665-a00a-357648e5bad6 Project (Entity type)	SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...
	c1f610d2-a25d-400a-b807-5306c34fe3fc Subject (Entity type)	A subject from 4DN produced as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project
	d7c20df5-d5b4-4c32-81f3-e7bc9b1a43b6 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNES2Y6YG9E
	1c986ee4-5d00-4174-b0c0-cb30dcfa1171 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNES2Y6YG9E
	4DNFIAN63RZ9.bw File (Entity type)	A 192 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFICZHJYZ3.bed.gz File (Entity type)	A 127 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI41S78WL.bw File (Entity type)	A 7.57 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI6E2TDTU.pairs.gz File (Entity type)	A 14.1 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIB8NZIAK.mcool File (Entity type)	A 3.45 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIUE5RAS6.hic File (Entity type)	A 4.91 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4871e338-b07d-4665-a00a-357648e5bad6

Project (Entity type)

SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...

c1f610d2-a25d-400a-b807-5306c34fe3fc

Subject (Entity type)

A subject from 4DN produced as part of the ee89349a 1d43 4048 9142 bc750f0f3b32 project

d7c20df5-d5b4-4c32-81f3-e7bc9b1a43b6

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNES2Y6YG9E

1c986ee4-5d00-4174-b0c0-cb30dcfa1171

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNES2Y6YG9E

4DNFIAN63RZ9.bw

File (Entity type)

A 192 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFICZHJYZ3.bed.gz

File (Entity type)

A 127 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI41S78WL.bw

File (Entity type)

A 7.57 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI6E2TDTU.pairs.gz

File (Entity type)

A 14.1 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIB8NZIAK.mcool

File (Entity type)

A 3.45 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIUE5RAS6.hic

File (Entity type)

A 4.91 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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