f7563b9d-3335-4d2c-aad7-f57f0cc553f0 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESDG6WDIU

Description:4DNESDG6WDIU: cryomilling TCC protocol variations - in vitro crosslinking, with SDS, without restriction digestion CTCC experiments with in vitro crosslinking without restriction digestion on GM12878 cells

Creation Time:2022-02-14T00:00:00

Abbreviation:4DNESDG6WDIU

Results found

Linked to

	Label	Description
	eda54849-45e6-4f96-82de-fea642bc194b Project (Entity type)	MAPPING THE 3D GENOME LANDSCAPE https://projectreporter.nih.gov/project_description.cfm?projectnumbe...
	c9affe27-c09e-46be-ac1c-a614df02587a Subject (Entity type)	A subject from 4DN produced as part of the eda54849 45e6 4f96 82de fea642bc194b project
	ef3b1a66-633e-4fcd-a8cd-2d515146a1e1 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESDG6WDIU
	4DNFIGXADXT9.mcool File (Entity type)	A 1.58 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIOFHVFTV.hic File (Entity type)	A 2.61 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFIZHUZUC5.pairs.gz File (Entity type)	A 4.37 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

eda54849-45e6-4f96-82de-fea642bc194b

Project (Entity type)

MAPPING THE 3D GENOME LANDSCAPE https://projectreporter.nih.gov/project_description.cfm?projectnumbe...

c9affe27-c09e-46be-ac1c-a614df02587a

Subject (Entity type)

A subject from 4DN produced as part of the eda54849 45e6 4f96 82de fea642bc194b project

ef3b1a66-633e-4fcd-a8cd-2d515146a1e1

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESDG6WDIU

4DNFIGXADXT9.mcool

File (Entity type)

A 1.58 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIOFHVFTV.hic

File (Entity type)

A 2.61 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFIZHUZUC5.pairs.gz

File (Entity type)

A 4.37 GB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.