5a70eb59-65d8-4370-83a4-e5b2c3f66367 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESNMAAN97

Description:4DNESNMAAN97: Hi-C on HFF cells - protocol variations - Formaldehyde+DSG, DpnII, HFFc6 (Tier 1) Hi-C experiments on HFFc6 crosslinked with both FA and DSG, digested with DpnII.

Creation Time:2021-01-04T00:00:00

Abbreviation:4DNESNMAAN97

Results found

Linked to

	Label	Description
	ae6c618f-7a8c-441e-a886-e30bbbe591da Project (Entity type)	CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...
	10aa2d32-9fd4-46ce-a585-827d8c7810c3 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	a6a9ef20-97d1-422d-a7e6-ea5e8c8fc3cc Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESNMAAN97
	5b95a0b2-ea97-419c-bc11-7eae6fa6d75e Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESNMAAN97
	4DNFINFTFBN2.pairs.gz File (Entity type)	A 50.2 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI3CGVRKU.bed.gz File (Entity type)	A 171 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI212GCZW.bedpe.gz File (Entity type)	A 2.28 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIAVXXO55.mcool File (Entity type)	A 7.02 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIUGZIPDM.txt.gz File (Entity type)	A 4.86 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project
	4DNFIRP5X7A3.bw File (Entity type)	A 211 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

ae6c618f-7a8c-441e-a886-e30bbbe591da

Project (Entity type)

CENTER FOR 3D STRUCTURE AND PHYSICS OF THE GENOME https://projectreporter.nih.gov/project_descriptio...

10aa2d32-9fd4-46ce-a585-827d8c7810c3

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

a6a9ef20-97d1-422d-a7e6-ea5e8c8fc3cc

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESNMAAN97

5b95a0b2-ea97-419c-bc11-7eae6fa6d75e

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESNMAAN97

4DNFINFTFBN2.pairs.gz

File (Entity type)

A 50.2 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI3CGVRKU.bed.gz

File (Entity type)

A 171 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI212GCZW.bedpe.gz

File (Entity type)

A 2.28 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIAVXXO55.mcool

File (Entity type)

A 7.02 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIUGZIPDM.txt.gz

File (Entity type)

A 4.86 MB file from 4DN produced from OBI:0003306 as part of the ae6c618f 7a8c 441e a886 e30bbbe591da project

4DNFIRP5X7A3.bw

File (Entity type)

A 211 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

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Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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