e6ef17c1-e334-4082-ba91-b7076d5d3f3d (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESUGKCFC5

Description:4DNESUGKCFC5: cryomilling TCC protocol variations - in vitro crosslinking, with SDS, NcoI digestion CTCC experiments with in vitro crosslinking with NcoI digestion on GM12878 cells

Creation Time:2022-02-14T00:00:00

Abbreviation:4DNESUGKCFC5

Results found

Linked to

	Label	Description
	eda54849-45e6-4f96-82de-fea642bc194b Project (Entity type)	MAPPING THE 3D GENOME LANDSCAPE https://projectreporter.nih.gov/project_description.cfm?projectnumbe...
	c9affe27-c09e-46be-ac1c-a614df02587a Subject (Entity type)	A subject from 4DN produced as part of the eda54849 45e6 4f96 82de fea642bc194b project
	df7be1ef-e550-4da7-a0e2-dd51b66145e1 Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESUGKCFC5
	4DNFIGOC9R2M.hic File (Entity type)	A 494 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFILYBJZUS.pairs.gz File (Entity type)	A 320 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project
	4DNFI8FMG978.mcool File (Entity type)	A 226 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

eda54849-45e6-4f96-82de-fea642bc194b

Project (Entity type)

MAPPING THE 3D GENOME LANDSCAPE https://projectreporter.nih.gov/project_description.cfm?projectnumbe...

c9affe27-c09e-46be-ac1c-a614df02587a

Subject (Entity type)

A subject from 4DN produced as part of the eda54849 45e6 4f96 82de fea642bc194b project

df7be1ef-e550-4da7-a0e2-dd51b66145e1

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESUGKCFC5

4DNFIGOC9R2M.hic

File (Entity type)

A 494 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFILYBJZUS.pairs.gz

File (Entity type)

A 320 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

4DNFI8FMG978.mcool

File (Entity type)

A 226 MB file from 4DN produced from OBI:0003306 as part of the 71171a4e dca1 44cb 8375 fafd896c6923 project

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Community

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.