c5f37398-eef1-40a1-9c7a-d46758f652b2 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESTAJJM3X

Description:4DNESTAJJM3X: DamID-seq on K562 cells (2018-10-22) - LaminB1-Dam LaminB1 DamID of K562 Tier 2 cells – cells were transduced with virus expressing Dam-LaminB1, gDNA was harvested after 4 days and processed for DamID-seq

Creation Time:2018-11-28T00:00:00

Abbreviation:4DNESTAJJM3X

Results found

Linked to

	Label	Description
	91b694c3-f4d7-4ddd-8278-16f94e15c1c5 Project (Entity type)	COMBINED CYTOLOGICAL, GENOMIC, AND FUNCTIONAL MAPPING OF NUCLEAR GENOME ORGANIZATION https://project...
	1032c021-c18a-49ab-90d2-fd2cc5a8e1b7 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4860c1bd-5079-40ec-8d30-747a63dae021 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESTAJJM3X
	aaa5a8b1-470d-4d12-9fa0-b3a08d10949d Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESTAJJM3X
	4DNFIHLTKWGL.bed.gz File (Entity type)	A 5.89 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIRMS3W12.txt.gz File (Entity type)	A 808 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIPWQR7QT.bed.gz File (Entity type)	A 15.2 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFI5LQYQM8.bw File (Entity type)	A 220 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIHWSM83D.txt.gz File (Entity type)	A 73.2 MB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIAYH82O4.bed.gz File (Entity type)	A 7.76 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

91b694c3-f4d7-4ddd-8278-16f94e15c1c5

Project (Entity type)

COMBINED CYTOLOGICAL, GENOMIC, AND FUNCTIONAL MAPPING OF NUCLEAR GENOME ORGANIZATION https://project...

1032c021-c18a-49ab-90d2-fd2cc5a8e1b7

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4860c1bd-5079-40ec-8d30-747a63dae021

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESTAJJM3X

aaa5a8b1-470d-4d12-9fa0-b3a08d10949d

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESTAJJM3X

4DNFIHLTKWGL.bed.gz

File (Entity type)

A 5.89 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIRMS3W12.txt.gz

File (Entity type)

A 808 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIPWQR7QT.bed.gz

File (Entity type)

A 15.2 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFI5LQYQM8.bw

File (Entity type)

A 220 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIHWSM83D.txt.gz

File (Entity type)

A 73.2 MB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIAYH82O4.bed.gz

File (Entity type)

A 7.76 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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