LDG-1378 (Collection)

Id Namespace:

Library of Integrated Network-Based Cellular Signatures

Identifier Namespace (Entity type)

Dcc Asset:

datapackage.zip

Processed File (Entity type)

Dcc:

LINCS

DCC (Entity type)

Persistent Id:https://lincsportal.ccs.miami.edu/datasets/view/LDG-1378

Has Time Series Data:false

Description:HCC1954 cells were grown in media with Lapatinib in 8 well MEMA for 72h and then fixed using 2% paraformaldehyde. Cells were stained with DAPI (nuclei), KRT5(Basal lineage), KRT19 (luminal lineage) and EdU (S phase activity). The cells were imaged on a Nikon HCA microscopy system, segmented with Cell Profiler, normalized using RUV and lowess using the spatial residuals as controls, and analyzed to identify microenvironment conditions that altered phenotypes of interest.\r\n

Creation Time:2016-11-10T00:00:00+00:00

Results found

Linked to

	Label	Description
	LINCS phase 2 Project (Entity type)	The LINCS Consortium is an NIH Common Fund program that supports six Data and Signature Generation C...
	Breast Anatomy (Entity type)	The upper ventral region of the torso of an organism.
	Homo sapiens Taxonomy (Entity type)	man
	LCL-1332 Subject (Entity type)	A subject from LINCS produced as part of the LINCS project
	LDG-1378:LCL-1332 Biosample (Entity type)	A biosample from LINCS produced as part of the LINCS phase 2 project
	LDS-1480.tar.gz File (Entity type)	A 1.84 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project
	LDS-1477.tar.gz File (Entity type)	A 892 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project
	LDS-1479.tar.gz File (Entity type)	A 24.1 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project
	LDS-1478.tar.gz File (Entity type)	A 14.7 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project

LINCS phase 2

Project (Entity type)

The LINCS Consortium is an NIH Common Fund program that supports six Data and Signature Generation C...

Breast

Anatomy (Entity type)

The upper ventral region of the torso of an organism.

Homo sapiens

Taxonomy (Entity type)

man

LCL-1332

Subject (Entity type)

A subject from LINCS produced as part of the LINCS project

LDG-1378:LCL-1332

Biosample (Entity type)

A biosample from LINCS produced as part of the LINCS phase 2 project

LDS-1480.tar.gz

File (Entity type)

A 1.84 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project

LDS-1477.tar.gz

File (Entity type)

A 892 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project

LDS-1479.tar.gz

File (Entity type)

A 24.1 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project

LDS-1478.tar.gz

File (Entity type)

A 14.7 MB file from LINCS produced from OBI:0002966 as part of the LINCS phase 2 project

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Community

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@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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