e0ff3dd1-0bc7-4c10-9976-95bbbe627277 (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNESWDLDMGN

Description:4DNESWDLDMGN: Hi-C on CTCF-AID tagged F123-CASTx129 - CTCF depleted by auxin treatment (0.5 mM, 48.0h) Replicates of F123 CAST X 129 mouse cells containing a genomically modified AID-tagged CTCF treated with Auxin for 48 hours and then prepared for in situ Hi-C

Creation Time:2018-05-31T00:00:00

Abbreviation:4DNESWDLDMGN

Results found

Linked to

	Label	Description
	4871e338-b07d-4665-a00a-357648e5bad6 Project (Entity type)	SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...
	f8ddbc70-a311-490b-b0ef-7549868a059c Subject (Entity type)	A subject from 4DN produced as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project
	f048f178-131e-49f3-a393-5e265c90fa2d Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNESWDLDMGN
	7a32bd32-c447-44f3-8ea8-4ef76c04c9bc Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNESWDLDMGN
	4DNFIOA35WGY.bw File (Entity type)	A 7.58 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIK9PS9GM.hic File (Entity type)	A 3.52 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIDHNCVEM.pairs.gz File (Entity type)	A 9.77 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIJA3JLGI.bed.gz File (Entity type)	A 116 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFI7QI85V6.bw File (Entity type)	A 193 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project
	4DNFIC453HVL.mcool File (Entity type)	A 4.05 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4871e338-b07d-4665-a00a-357648e5bad6

Project (Entity type)

SAN DIEGO CENTER FOR 4D NUCLEOME RESEARCH https://projectreporter.nih.gov/project_description.cfm?pr...

f8ddbc70-a311-490b-b0ef-7549868a059c

Subject (Entity type)

A subject from 4DN produced as part of the 4871e338 b07d 4665 a00a 357648e5bad6 project

f048f178-131e-49f3-a393-5e265c90fa2d

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNESWDLDMGN

7a32bd32-c447-44f3-8ea8-4ef76c04c9bc

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNESWDLDMGN

4DNFIOA35WGY.bw

File (Entity type)

A 7.58 MB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIK9PS9GM.hic

File (Entity type)

A 3.52 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIDHNCVEM.pairs.gz

File (Entity type)

A 9.77 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIJA3JLGI.bed.gz

File (Entity type)

A 116 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFI7QI85V6.bw

File (Entity type)

A 193 KB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

4DNFIC453HVL.mcool

File (Entity type)

A 4.05 GB file from 4DN produced from OBI:0003306 as part of the b0b9c607 f8b4 4f02 93f4 9895b461334b project

DISPLAY PER PAGE

CFDE Workbench

Consortium

Community

Resources

@CFDE Workbench 2025

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

This repository is under review for potential modification in compliance with Administration directives.