3d5af919-7cab-4d0e-9275-f2c8e0ab06ef (Collection)

Id Namespace:

4D Nucleome

Identifier Namespace (Entity type)

Dcc Asset:

250924 c2m2 4dn sub.zip

Processed File (Entity type)

Dcc:

4DN

DCC (Entity type)

Persistent Id:https://data.4dnucleome.org/4DNES9VPS41V

Description:4DNES9VPS41V: DamID-seq on HFFc6 cells (2020-07-01) - Nucleolar Targeting Signal (4X-AP3)-Dam DamID for Nucleolus (4X-AP3) on HFF wildtype cells - cells were transduced with virus expressing a Dam fusion protein, gDNA was harvested after 3 or 4 days and processed for DamID-seq

Creation Time:2023-11-03T00:00:00

Abbreviation:4DNES9VPS41V

Results found

Linked to

	Label	Description
	91b694c3-f4d7-4ddd-8278-16f94e15c1c5 Project (Entity type)	COMBINED CYTOLOGICAL, GENOMIC, AND FUNCTIONAL MAPPING OF NUCLEAR GENOME ORGANIZATION https://project...
	10aa2d32-9fd4-46ce-a585-827d8c7810c3 Subject (Entity type)	A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	8aebfe7f-a196-44bf-987b-a54b950f9d6e Collection (Entity type)	Biological replicate 1, Technical replicate 1 of 4DNES9VPS41V
	35bcf6a1-34a4-4621-b85b-99ca21ab7ab4 Collection (Entity type)	Biological replicate 2, Technical replicate 1 of 4DNES9VPS41V
	4DNFICKMAZHU.bed.gz File (Entity type)	A 4.72 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIB461LR8.bw File (Entity type)	A 38.1 MB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFIL154KGV.txt.gz File (Entity type)	A 129 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFI8G7ETI6.txt.gz File (Entity type)	A 409 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFI78VB896.bw File (Entity type)	A 949 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project
	4DNFI9D5GZ6U.bed.gz File (Entity type)	A 8.98 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

91b694c3-f4d7-4ddd-8278-16f94e15c1c5

Project (Entity type)

COMBINED CYTOLOGICAL, GENOMIC, AND FUNCTIONAL MAPPING OF NUCLEAR GENOME ORGANIZATION https://project...

10aa2d32-9fd4-46ce-a585-827d8c7810c3

Subject (Entity type)

A subject from 4DN produced as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

8aebfe7f-a196-44bf-987b-a54b950f9d6e

Collection (Entity type)

Biological replicate 1, Technical replicate 1 of 4DNES9VPS41V

35bcf6a1-34a4-4621-b85b-99ca21ab7ab4

Collection (Entity type)

Biological replicate 2, Technical replicate 1 of 4DNES9VPS41V

4DNFICKMAZHU.bed.gz

File (Entity type)

A 4.72 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIB461LR8.bw

File (Entity type)

A 38.1 MB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFIL154KGV.txt.gz

File (Entity type)

A 129 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFI8G7ETI6.txt.gz

File (Entity type)

A 409 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFI78VB896.bw

File (Entity type)

A 949 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

4DNFI9D5GZ6U.bed.gz

File (Entity type)

A 8.98 KB file from 4DN produced from OBI:0003299 as part of the 91b694c3 f4d7 4ddd 8278 16f94e15c1c5 project

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The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

Consortium

Community

Resources

CFDE Workbench

The CFDE Workbench is actively being developed and maintained by the CFDE Data Resource Center (DRC).The DRC is funded by OT2OD036435 from the Common Fund at the National Institutes of Health.

@CFDE Workbench 2025

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